{"title":"(1R,3R)-3-羟基环戊烷甲醇的化学合成:碳环-ddA 的中间体。","authors":"","doi":"10.1016/j.jbiosc.2024.05.002","DOIUrl":null,"url":null,"abstract":"<div><p>The synthesis of carbocyclic-ddA, a potent antiviral agent against hepatitis B, relies significantly on (1<em>R</em>,3<em>R</em>)-3-hydroxycyclopentanemethanol as a key intermediate. To effectively produce this intermediate, our study employed a chemoenzymatic approach. The selection of appropriate biocatalysts was based on substrate similarity, leading us to adopt the CrS enoate reductase derived from <em>Thermus scotoductus</em> SA-01. Additionally, we developed an enzymatic system for NADH regeneration, utilising formate dehydrogenase from <em>Candida boidinii</em>. This system facilitated the efficient catalysis of (<em>S</em>)-4-(hydroxymethyl)cyclopent-2-enone, resulting in the formation of (3<em>R</em>)-3-(hydroxymethyl) cyclopentanone. Furthermore, we successfully cloned, expressed, purified, and characterized the CrS enzyme in <em>Escherichia coli</em>. Optimal reaction conditions were determined, revealing that the highest activity occurred at 45 °C and pH 8.0. By employing 5 mM (<em>S</em>)-4-(hydroxymethyl)cyclopent-2-enone, 0.05 mM FMN, 0.2 mM NADH, 10 μM CrS, 40 μM formic acid dehydrogenase, and 40 mM sodium formate, complete conversion was achieved within 45 min at 35 °C and pH 7.0. Subsequently, (1<em>R</em>,3<em>R</em>)-3-hydroxycyclopentanemethanol was obtained through a simple three-step chemical conversion process. This study not only presents an effective method for synthesizing the crucial intermediate but also highlights the importance of biocatalysts and enzymatic systems in chemoenzymatic synthesis approaches.</p></div>","PeriodicalId":15199,"journal":{"name":"Journal of bioscience and bioengineering","volume":"138 2","pages":"Pages 111-117"},"PeriodicalIF":2.3000,"publicationDate":"2024-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Chemoenzymatic synthesis of (1R,3R)-3-hydroxycyclopentanemethanol: An intermediate of carbocyclic-ddA\",\"authors\":\"\",\"doi\":\"10.1016/j.jbiosc.2024.05.002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The synthesis of carbocyclic-ddA, a potent antiviral agent against hepatitis B, relies significantly on (1<em>R</em>,3<em>R</em>)-3-hydroxycyclopentanemethanol as a key intermediate. To effectively produce this intermediate, our study employed a chemoenzymatic approach. The selection of appropriate biocatalysts was based on substrate similarity, leading us to adopt the CrS enoate reductase derived from <em>Thermus scotoductus</em> SA-01. Additionally, we developed an enzymatic system for NADH regeneration, utilising formate dehydrogenase from <em>Candida boidinii</em>. This system facilitated the efficient catalysis of (<em>S</em>)-4-(hydroxymethyl)cyclopent-2-enone, resulting in the formation of (3<em>R</em>)-3-(hydroxymethyl) cyclopentanone. Furthermore, we successfully cloned, expressed, purified, and characterized the CrS enzyme in <em>Escherichia coli</em>. Optimal reaction conditions were determined, revealing that the highest activity occurred at 45 °C and pH 8.0. By employing 5 mM (<em>S</em>)-4-(hydroxymethyl)cyclopent-2-enone, 0.05 mM FMN, 0.2 mM NADH, 10 μM CrS, 40 μM formic acid dehydrogenase, and 40 mM sodium formate, complete conversion was achieved within 45 min at 35 °C and pH 7.0. Subsequently, (1<em>R</em>,3<em>R</em>)-3-hydroxycyclopentanemethanol was obtained through a simple three-step chemical conversion process. This study not only presents an effective method for synthesizing the crucial intermediate but also highlights the importance of biocatalysts and enzymatic systems in chemoenzymatic synthesis approaches.</p></div>\",\"PeriodicalId\":15199,\"journal\":{\"name\":\"Journal of bioscience and bioengineering\",\"volume\":\"138 2\",\"pages\":\"Pages 111-117\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2024-05-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of bioscience and bioengineering\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1389172324001312\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of bioscience and bioengineering","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1389172324001312","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
碳环-ddA 是一种有效的乙型肝炎抗病毒药物,其合成在很大程度上依赖于作为关键中间体的 (1R,3R)-3- 羟基环戊烷甲醇。为了有效地生产这种中间体,我们的研究采用了化学酶法。我们根据底物的相似性来选择合适的生物催化剂,最终采用了来自嗜热菌(Thermus scotoductus)SA-01 的 CrS 烯酸还原酶。此外,我们还利用白色念珠菌中的甲酸脱氢酶开发了一种用于 NADH 再生的酶系统。该系统能有效催化 (S)-4-(hydroxymethyl)cyclopent-2-enone 生成 (3R)-3-(hydroxymethyl) cyclopentanone。此外,我们还在大肠杆菌中成功克隆、表达、纯化和鉴定了 CrS 酶。我们确定了最佳反应条件,发现在 45 °C 和 pH 值为 8.0 时活性最高。通过使用 5 mM (S)-4-(羟甲基)环戊-2-烯酮、0.05 mM FMN、0.2 mM NADH、10 μM CrS、40 μM 甲酸脱氢酶和 40 mM 甲酸钠,在 35 °C、pH 值为 7.0 的条件下,在 45 分钟内实现了完全转化。随后,通过简单的三步化学转化过程,得到了 (1R,3R)-3-羟基环戊烷甲醇。这项研究不仅提出了一种合成关键中间体的有效方法,还强调了生物催化剂和酶系统在化学合成方法中的重要性。
Chemoenzymatic synthesis of (1R,3R)-3-hydroxycyclopentanemethanol: An intermediate of carbocyclic-ddA
The synthesis of carbocyclic-ddA, a potent antiviral agent against hepatitis B, relies significantly on (1R,3R)-3-hydroxycyclopentanemethanol as a key intermediate. To effectively produce this intermediate, our study employed a chemoenzymatic approach. The selection of appropriate biocatalysts was based on substrate similarity, leading us to adopt the CrS enoate reductase derived from Thermus scotoductus SA-01. Additionally, we developed an enzymatic system for NADH regeneration, utilising formate dehydrogenase from Candida boidinii. This system facilitated the efficient catalysis of (S)-4-(hydroxymethyl)cyclopent-2-enone, resulting in the formation of (3R)-3-(hydroxymethyl) cyclopentanone. Furthermore, we successfully cloned, expressed, purified, and characterized the CrS enzyme in Escherichia coli. Optimal reaction conditions were determined, revealing that the highest activity occurred at 45 °C and pH 8.0. By employing 5 mM (S)-4-(hydroxymethyl)cyclopent-2-enone, 0.05 mM FMN, 0.2 mM NADH, 10 μM CrS, 40 μM formic acid dehydrogenase, and 40 mM sodium formate, complete conversion was achieved within 45 min at 35 °C and pH 7.0. Subsequently, (1R,3R)-3-hydroxycyclopentanemethanol was obtained through a simple three-step chemical conversion process. This study not only presents an effective method for synthesizing the crucial intermediate but also highlights the importance of biocatalysts and enzymatic systems in chemoenzymatic synthesis approaches.
期刊介绍:
The Journal of Bioscience and Bioengineering is a research journal publishing original full-length research papers, reviews, and Letters to the Editor. The Journal is devoted to the advancement and dissemination of knowledge concerning fermentation technology, biochemical engineering, food technology and microbiology.