{"title":"新型肟配体及其 Cu(II) 复合物的合成与表征:DFT 计算、体外抗菌活性、药物相似性和分子对接研究","authors":"Seda Alkan, Tufan Topal, Emin Karapınar","doi":"10.1134/S003602442405025X","DOIUrl":null,"url":null,"abstract":"<p>In this study, 1,2-phenylenediamine-bis(isonitrosomethoxy-<i>p</i>-tolil keton) ligand and its Cu metal complex were synthesized and its structure was determined by spectroscopic methods. UV-visible spectra, mass and NMR spectra were investigated in chloroform. The FTIR spectra of these compounds were characterized in solid state. The geometry of the optimized ligand was calculated at 6-31G(<i>d</i>,<i>p</i>) levels by DFT/B3LYP method. The HOMO and LUMO void energies, MEP analysis, vibration analysis, geometric structure, <sup>13</sup>C-NMR and <sup>1</sup>H-NMR chemical shift calculations and other parameters of this calculated compound were obtained with the DFT/B3LYP/6-31G(<i>d</i>,<i>p</i>) basis set. The antibacterial activity of the ligand and complex was tested against gram positive and gram negative bacteria (<i>Escherichia coli</i> and <i>Staphylococcus aureus</i>). Molecular docking was performed to identify the binding sites of the compounds. The biological activity and drug-likeness of the ligand and complex were investigated.</p>","PeriodicalId":767,"journal":{"name":"Russian Journal of Physical Chemistry A","volume":null,"pages":null},"PeriodicalIF":0.7000,"publicationDate":"2024-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Synthesis and Characterization of New Oxime Ligand and Its Cu(II) Complex: DFT Calculations, in Vitro Antibacterial Activity, Drug-Likeness Properties, and Molecular Docking Studies\",\"authors\":\"Seda Alkan, Tufan Topal, Emin Karapınar\",\"doi\":\"10.1134/S003602442405025X\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>In this study, 1,2-phenylenediamine-bis(isonitrosomethoxy-<i>p</i>-tolil keton) ligand and its Cu metal complex were synthesized and its structure was determined by spectroscopic methods. UV-visible spectra, mass and NMR spectra were investigated in chloroform. The FTIR spectra of these compounds were characterized in solid state. The geometry of the optimized ligand was calculated at 6-31G(<i>d</i>,<i>p</i>) levels by DFT/B3LYP method. The HOMO and LUMO void energies, MEP analysis, vibration analysis, geometric structure, <sup>13</sup>C-NMR and <sup>1</sup>H-NMR chemical shift calculations and other parameters of this calculated compound were obtained with the DFT/B3LYP/6-31G(<i>d</i>,<i>p</i>) basis set. The antibacterial activity of the ligand and complex was tested against gram positive and gram negative bacteria (<i>Escherichia coli</i> and <i>Staphylococcus aureus</i>). Molecular docking was performed to identify the binding sites of the compounds. The biological activity and drug-likeness of the ligand and complex were investigated.</p>\",\"PeriodicalId\":767,\"journal\":{\"name\":\"Russian Journal of Physical Chemistry A\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.7000,\"publicationDate\":\"2024-05-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Russian Journal of Physical Chemistry A\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://link.springer.com/article/10.1134/S003602442405025X\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Russian Journal of Physical Chemistry A","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1134/S003602442405025X","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Synthesis and Characterization of New Oxime Ligand and Its Cu(II) Complex: DFT Calculations, in Vitro Antibacterial Activity, Drug-Likeness Properties, and Molecular Docking Studies
In this study, 1,2-phenylenediamine-bis(isonitrosomethoxy-p-tolil keton) ligand and its Cu metal complex were synthesized and its structure was determined by spectroscopic methods. UV-visible spectra, mass and NMR spectra were investigated in chloroform. The FTIR spectra of these compounds were characterized in solid state. The geometry of the optimized ligand was calculated at 6-31G(d,p) levels by DFT/B3LYP method. The HOMO and LUMO void energies, MEP analysis, vibration analysis, geometric structure, 13C-NMR and 1H-NMR chemical shift calculations and other parameters of this calculated compound were obtained with the DFT/B3LYP/6-31G(d,p) basis set. The antibacterial activity of the ligand and complex was tested against gram positive and gram negative bacteria (Escherichia coli and Staphylococcus aureus). Molecular docking was performed to identify the binding sites of the compounds. The biological activity and drug-likeness of the ligand and complex were investigated.
期刊介绍:
Russian Journal of Physical Chemistry A. Focus on Chemistry (Zhurnal Fizicheskoi Khimii), founded in 1930, offers a comprehensive review of theoretical and experimental research from the Russian Academy of Sciences, leading research and academic centers from Russia and from all over the world.
Articles are devoted to chemical thermodynamics and thermochemistry, biophysical chemistry, photochemistry and magnetochemistry, materials structure, quantum chemistry, physical chemistry of nanomaterials and solutions, surface phenomena and adsorption, and methods and techniques of physicochemical studies.