{"title":"评估 BERT 自然语言处理模型,实现 CT 和 MRI 分诊及方案选择自动化。","authors":"Jason Yao, Abdullah Alabousi, Oleg Mironov","doi":"10.1177/08465371241255895","DOIUrl":null,"url":null,"abstract":"<p><p><b>Purpose:</b> To evaluate the accuracy of a Bidirectional Encoder Representations for Transformers (BERT) Natural Language Processing (NLP) model for automating triage and protocol selection of cross-sectional image requisitions. <b>Methods:</b> A retrospective study was completed using 222 392 CT and MRI studies from a single Canadian university hospital database (January 2018-September 2022). Three hundred unique protocols (116 CT and 184 MRI) were included. A BERT model was trained, validated, and tested using an 80%-10%-10% stratified split. Naive Bayes (NB) and Support Vector Machine (SVM) machine learning models were used as comparators. Models were assessed using F1 score, precision, recall, and area under the receiver operating characteristic curve (AUROC). The BERT model was also assessed for multi-class protocol suggestion and subgroups based on referral location, modality, and imaging section. <b>Results:</b> BERT was superior to SVM for protocol selection (F1 score: BERT-0.901 vs SVM-0.881). However, was not significantly different from SVM for triage prediction (F1 score: BERT-0.844 vs SVM-0.845). Both models outperformed NB for protocol and triage. BERT had superior performance on minority classes compared to SVM and NB. For multiclass prediction, BERT accuracy was up to 0.991 for top-5 protocol suggestion, and 0.981 for top-2 triage suggestion. Emergency department patients had the highest F1 scores for both protocol (0.957) and triage (0.986), compared to inpatients and outpatients. <b>Conclusion:</b> The BERT NLP model demonstrated strong performance in automating the triage and protocol selection of radiology studies, showing potential to enhance radiologist workflows. These findings suggest the feasibility of using advanced NLP models to streamline radiology operations.</p>","PeriodicalId":55290,"journal":{"name":"Canadian Association of Radiologists Journal-Journal De L Association Canadienne Des Radiologistes","volume":null,"pages":null},"PeriodicalIF":2.9000,"publicationDate":"2024-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Evaluation of a BERT Natural Language Processing Model for Automating CT and MRI Triage and Protocol Selection.\",\"authors\":\"Jason Yao, Abdullah Alabousi, Oleg Mironov\",\"doi\":\"10.1177/08465371241255895\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><b>Purpose:</b> To evaluate the accuracy of a Bidirectional Encoder Representations for Transformers (BERT) Natural Language Processing (NLP) model for automating triage and protocol selection of cross-sectional image requisitions. <b>Methods:</b> A retrospective study was completed using 222 392 CT and MRI studies from a single Canadian university hospital database (January 2018-September 2022). Three hundred unique protocols (116 CT and 184 MRI) were included. A BERT model was trained, validated, and tested using an 80%-10%-10% stratified split. Naive Bayes (NB) and Support Vector Machine (SVM) machine learning models were used as comparators. Models were assessed using F1 score, precision, recall, and area under the receiver operating characteristic curve (AUROC). The BERT model was also assessed for multi-class protocol suggestion and subgroups based on referral location, modality, and imaging section. <b>Results:</b> BERT was superior to SVM for protocol selection (F1 score: BERT-0.901 vs SVM-0.881). However, was not significantly different from SVM for triage prediction (F1 score: BERT-0.844 vs SVM-0.845). Both models outperformed NB for protocol and triage. BERT had superior performance on minority classes compared to SVM and NB. For multiclass prediction, BERT accuracy was up to 0.991 for top-5 protocol suggestion, and 0.981 for top-2 triage suggestion. Emergency department patients had the highest F1 scores for both protocol (0.957) and triage (0.986), compared to inpatients and outpatients. <b>Conclusion:</b> The BERT NLP model demonstrated strong performance in automating the triage and protocol selection of radiology studies, showing potential to enhance radiologist workflows. These findings suggest the feasibility of using advanced NLP models to streamline radiology operations.</p>\",\"PeriodicalId\":55290,\"journal\":{\"name\":\"Canadian Association of Radiologists Journal-Journal De L Association Canadienne Des Radiologistes\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2024-06-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Canadian Association of Radiologists Journal-Journal De L Association Canadienne Des Radiologistes\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1177/08465371241255895\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Canadian Association of Radiologists Journal-Journal De L Association Canadienne Des Radiologistes","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1177/08465371241255895","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
Evaluation of a BERT Natural Language Processing Model for Automating CT and MRI Triage and Protocol Selection.
Purpose: To evaluate the accuracy of a Bidirectional Encoder Representations for Transformers (BERT) Natural Language Processing (NLP) model for automating triage and protocol selection of cross-sectional image requisitions. Methods: A retrospective study was completed using 222 392 CT and MRI studies from a single Canadian university hospital database (January 2018-September 2022). Three hundred unique protocols (116 CT and 184 MRI) were included. A BERT model was trained, validated, and tested using an 80%-10%-10% stratified split. Naive Bayes (NB) and Support Vector Machine (SVM) machine learning models were used as comparators. Models were assessed using F1 score, precision, recall, and area under the receiver operating characteristic curve (AUROC). The BERT model was also assessed for multi-class protocol suggestion and subgroups based on referral location, modality, and imaging section. Results: BERT was superior to SVM for protocol selection (F1 score: BERT-0.901 vs SVM-0.881). However, was not significantly different from SVM for triage prediction (F1 score: BERT-0.844 vs SVM-0.845). Both models outperformed NB for protocol and triage. BERT had superior performance on minority classes compared to SVM and NB. For multiclass prediction, BERT accuracy was up to 0.991 for top-5 protocol suggestion, and 0.981 for top-2 triage suggestion. Emergency department patients had the highest F1 scores for both protocol (0.957) and triage (0.986), compared to inpatients and outpatients. Conclusion: The BERT NLP model demonstrated strong performance in automating the triage and protocol selection of radiology studies, showing potential to enhance radiologist workflows. These findings suggest the feasibility of using advanced NLP models to streamline radiology operations.
期刊介绍:
The Canadian Association of Radiologists Journal is a peer-reviewed, Medline-indexed publication that presents a broad scientific review of radiology in Canada. The Journal covers such topics as abdominal imaging, cardiovascular radiology, computed tomography, continuing professional development, education and training, gastrointestinal radiology, health policy and practice, magnetic resonance imaging, musculoskeletal radiology, neuroradiology, nuclear medicine, pediatric radiology, radiology history, radiology practice guidelines and advisories, thoracic and cardiac imaging, trauma and emergency room imaging, ultrasonography, and vascular and interventional radiology. Article types considered for publication include original research articles, critically appraised topics, review articles, guest editorials, pictorial essays, technical notes, and letter to the Editor.