全面回顾 COVID-19 尖峰蛋白与哺乳动物小型和大型热休克蛋白之间的相互作用。

Q2 Biochemistry, Genetics and Molecular Biology Biomolecular Concepts Pub Date : 2024-06-14 eCollection Date: 2024-01-01 DOI:10.1515/bmc-2022-0027
Liberty T Navhaya, Dzveta Mutsawashe Blessing, Mthembu Yamkela, Sesethu Godlo, Xolani Henry Makhoba
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引用次数: 0

摘要

冠状病毒病 2019(COVID-19)是一种新型疾病,对全球人类生命和国家经济造成了毁灭性影响。这种疾病表现出类似的寄生特性,需要宿主的生物大分子才能生存和繁殖。位于 COVID-19 病毒表面的尖峰糖蛋白严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2 尖峰蛋白)是根据其结构开发抗病毒药物的潜在热点。COVID-19 病毒唤醒了辅助攻击者的伴侣蛋白系统,从而有利于感染。为了研究 SARS-CoV-2 穗状病毒蛋白与人类分子伴侣(HSPA8 和 sHSP27)之间的相互作用,我们进行了一系列步骤,包括序列获取和分析,然后进行多序列比对、同源建模和蛋白质-蛋白质对接,我们使用 Cluspro 预测了 SARS-CoV-2 穗状病毒蛋白与感兴趣的人类分子伴侣之间的相互作用。我们的研究结果表明,SARS-CoV-2 穗状病毒蛋白由三条不同的链 A、B 和 C 组成,它们与人类 HSPA8 和 HSP27 相互作用,形成氢键、疏水作用和静电作用,人类 HSPA8 的结合能分别为 -828.3 和 -827.9 kcal/mol,HSP27 的结合能分别为 -1166.7 和 -1165.9 kcal/mol。
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A comprehensive review of the interaction between COVID-19 spike proteins with mammalian small and major heat shock proteins.

Coronavirus disease 2019 (COVID-19) is a novel disease that had devastating effects on human lives and the country's economies worldwide. This disease shows similar parasitic traits, requiring the host's biomolecules for its survival and propagation. Spike glycoproteins severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2 spike protein) located on the surface of the COVID-19 virus serve as a potential hotspot for antiviral drug development based on their structure. COVID-19 virus calls into action the chaperonin system that assists the attacker, hence favoring infection. To investigate the interaction that occurs between SARS-CoV-2 spike protein and human molecular chaperons (HSPA8 and sHSP27), a series of steps were carried out which included sequence attainment and analysis, followed by multiple sequence alignment, homology modeling, and protein-protein docking which we performed using Cluspro to predict the interactions between SARS-CoV-2 spike protein and human molecular chaperones of interest. Our findings depicted that SARS-CoV-2 spike protein consists of three distinct chains, chains A, B, and C, which interact forming hydrogen bonds, hydrophobic interactions, and electrostatic interactions with both human HSPA8 and HSP27 with -828.3 and -827.9 kcal/mol as binding energies for human HSPA8 and -1166.7 and -1165.9 kcal/mol for HSP27.

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来源期刊
Biomolecular Concepts
Biomolecular Concepts Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (all)
CiteScore
5.30
自引率
0.00%
发文量
27
审稿时长
12 weeks
期刊介绍: BioMolecular Concepts is a peer-reviewed open access journal fostering the integration of different fields of biomolecular research. The journal aims to provide expert summaries from prominent researchers, and conclusive extensions of research data leading to new and original, testable hypotheses. Aspects of research that can promote related fields, and lead to novel insight into biological mechanisms or potential medical applications are of special interest. Original research articles reporting new data of broad significance are also welcome. Topics: -cellular and molecular biology- genetics and epigenetics- biochemistry- structural biology- neurosciences- developmental biology- molecular medicine- pharmacology- microbiology- plant biology and biotechnology.
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