利用开放数据分析厄瓜多尔 COVID-19 基因突变的传播和演变情况

Life Pub Date : 2024-06-07 DOI:10.3390/life14060735
César Guevara, D. Coronel, Byron Salazar, Jorge Salazar, Hugo Arias-Flores
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摘要

目前,利用从医院和卫生组织编制的患者信息库中提取的 COVID-19 相关数据进行分析和预测至关重要。这些工作极大地促进了疫苗开发和应急技术的制定,为防止疾病复发和有效控制疾病传播提供了重要工具。在这种情况下,目前的研究重点是利用厄瓜多尔的公开数据,分析 SARS-CoV-2 病毒基因序列的生物信息和 COVID-19 受影响病人的临床数据。这包括考虑年龄、性别和地理位置等变量,以了解变异的演变及其在厄瓜多尔各省的分布情况。数据分析采用了跨行业数据挖掘标准流程(CRISP-DM)方法。采用了各种数据预处理和统计分析技术,包括皮尔逊相关性、卡方检验和方差分析(ANOVA)。统计图表的使用使结果更加直观。研究结果揭示了病毒的遗传多样性及其与临床变量的相关性,为全面了解 COVID-19 在厄瓜多尔的传播动态提供了依据。研究强调了影响人群易感性的关键变量,研究结果突出了变异监测的重要性,并表明有必要在全球范围内扩大这一研究领域。
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Analysis of the Spread and Evolution of COVID-19 Mutations in Ecuador Using Open Data
Currently, the analyses of and prediction using COVID-19-related data extracted from patient information repositories compiled by hospitals and health organizations are of paramount importance. These efforts significantly contribute to vaccine development and the formulation of contingency techniques, providing essential tools to prevent resurgence and to effectively manage the spread of the disease. In this context, the present research focuses on analyzing the biological information of the SARS-CoV-2 viral gene sequences and the clinical data of COVID-19-affected patients using publicly accessible data from Ecuador. This involves considering variables such as age, gender, and geographical location to understand the evolution of mutations and their distributions across Ecuadorian provinces. The Cross-Industry Standard Process for Data Mining (CRISP-DM) methodology is applied for data analysis. Various data preprocessing and statistical analysis techniques are employed, including Pearson correlation, the chi-square test, and analysis of variance (ANOVA). Statistical diagrams and charts are used to facilitate a better visualization of the results. The results illuminate the genetic diversity of the virus and its correlation with clinical variables, offering a comprehensive understanding of the dynamics of COVID-19 spread in Ecuador. Critical variables influencing population vulnerability are highlighted, and the findings underscore the significance of mutation monitoring and indicate a need for global expansion of the research area.
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