心血管研究机理建模和分析指南》。

IF 4.1 2区 医学 Q1 CARDIAC & CARDIOVASCULAR SYSTEMS American journal of physiology. Heart and circulatory physiology Pub Date : 2024-08-01 Epub Date: 2024-06-21 DOI:10.1152/ajpheart.00766.2023
Mitchel J Colebank, Pim A Oomen, Colleen M Witzenburg, Anna Grosberg, Daniel A Beard, Dirk Husmeier, Mette S Olufsen, Naomi C Chesler
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引用次数: 0

摘要

计算模型或内部模型是研究心血管功能的有效、非侵入性工具。这些模型可用于分析实验和临床数据,以确定(非)正常心血管生理学的可能机制。近年来,计算能力和数据管理方面的进步催生了创新而复杂的建模框架,可在多个尺度上模拟心血管功能。虽然计算机模型常用于多个学科,但在心血管研究中缺乏实施计算机模型的简明指南。为了响应最近关于提高研究可重复性的呼吁,科学家们在开发和应用计算模型进行研究时,必须坚持可信的做法。本手稿的目的是提供一份共识文件,确定心血管研究中硅内计算建模的最佳实践。这些指南提供了机理模型开发、模型分析以及利用统计学基本原理进行正式模型校准的必要方法。我们概述了心血管研究中计算建模的严格实践,并讨论了其与实验和临床数据的协同价值。
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Guidelines for mechanistic modeling and analysis in cardiovascular research.

Computational, or in silico, models are an effective, noninvasive tool for investigating cardiovascular function. These models can be used in the analysis of experimental and clinical data to identify possible mechanisms of (ab)normal cardiovascular physiology. Recent advances in computing power and data management have led to innovative and complex modeling frameworks that simulate cardiovascular function across multiple scales. While commonly used in multiple disciplines, there is a lack of concise guidelines for the implementation of computer models in cardiovascular research. In line with recent calls for more reproducible research, it is imperative that scientists adhere to credible practices when developing and applying computational models to their research. The goal of this manuscript is to provide a consensus document that identifies best practices for in silico computational modeling in cardiovascular research. These guidelines provide the necessary methods for mechanistic model development, model analysis, and formal model calibration using fundamentals from statistics. We outline rigorous practices for computational, mechanistic modeling in cardiovascular research and discuss its synergistic value to experimental and clinical data.

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来源期刊
CiteScore
9.60
自引率
10.40%
发文量
202
审稿时长
2-4 weeks
期刊介绍: The American Journal of Physiology-Heart and Circulatory Physiology publishes original investigations, reviews and perspectives on the physiology of the heart, vasculature, and lymphatics. These articles include experimental and theoretical studies of cardiovascular function at all levels of organization ranging from the intact and integrative animal and organ function to the cellular, subcellular, and molecular levels. The journal embraces new descriptions of these functions and their control systems, as well as their basis in biochemistry, biophysics, genetics, and cell biology. Preference is given to research that provides significant new mechanistic physiological insights that determine the performance of the normal and abnormal heart and circulation.
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