有偏差的罕见事件模拟的动态重权重。

IF 11.7 1区 化学 Q1 CHEMISTRY, PHYSICAL Annual review of physical chemistry Pub Date : 2024-06-01 DOI:10.1146/annurev-physchem-083122-124538
Bettina G Keller, Peter G Bolhuis
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引用次数: 0

摘要

动态再加权技术旨在从修正势能面的模拟中恢复正确的分子动力学。它们对于分子罕见事件的无偏增强采样模拟非常重要。在此,我们回顾了修正势能的动态再加权理论框架。在概述越来越详细的动力学模型的基础上,我们讨论了对双态动力学、多态动力学和路径积分进行重新加权的技术。我们探讨了过渡路径采样的自然联系,以及如何对非均衡力的影响进行再加权。最后,我们展望了动态再加权如何与集体变量优化技术和现代势能面相结合。
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Dynamical Reweighting for Biased Rare Event Simulations.

Dynamical reweighting techniques aim to recover the correct molecular dynamics from a simulation at a modified potential energy surface. They are important for unbiasing enhanced sampling simulations of molecular rare events. Here, we review the theoretical frameworks of dynamical reweighting for modified potentials. Based on an overview of kinetic models with increasing level of detail, we discuss techniques to reweight two-state dynamics, multistate dynamics, and path integrals. We explore the natural link to transition path sampling and how the effect of nonequilibrium forces can be reweighted. We end by providing an outlook on how dynamical reweighting integrates with techniques for optimizing collective variables and with modern potential energy surfaces.

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来源期刊
CiteScore
28.00
自引率
0.00%
发文量
21
期刊介绍: The Annual Review of Physical Chemistry has been published since 1950 and is a comprehensive resource for significant advancements in the field. It encompasses various sub-disciplines such as biophysical chemistry, chemical kinetics, colloids, electrochemistry, geochemistry and cosmochemistry, chemistry of the atmosphere and climate, laser chemistry and ultrafast processes, the liquid state, magnetic resonance, physical organic chemistry, polymers and macromolecules, and others.
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