全面的泛癌症分析表明,C5orf34 调节着肺癌的增殖和死亡率。

IF 3.9 4区 生物学 Q1 GENETICS & HEREDITY Functional & Integrative Genomics Pub Date : 2024-06-29 DOI:10.1007/s10142-024-01397-w
Meng Yang, Yuhan Deng, Yu Ma, Chunli Song, Zhenhua Wu, Xiayimaierdan Yibulayin, Xiaohong Sun, Yunquan Guo, Dan He
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引用次数: 0

摘要

C5orf34 基因在哺乳动物中具有进化保护性,新的证据表明它可能参与了肿瘤的发展;然而,目前还缺乏对该基因的全面研究。本研究旨在阐明 C5orf34 在癌症中的功能属性和潜在机制。为了评估其临床预测价值,我们对 C5orf34 的泛癌症表达、临床数据、突变和甲基化数据进行了分析。此外,我们还通过相关分析研究了 C5orf34 与肿瘤突变负荷(TMB)、免疫细胞浸润和微卫星不稳定性(MSI)之间的相关性。此外,我们还采用免疫组化(IHC)染色来验证临床样本,并通过基因敲除和过表达实验以及转录组RNA测序来研究C5orf34对LUAD细胞的影响。根据我们的研究,C5orf34在大多数恶性肿瘤中都有高表达。C5orf34的上调受DNA拷贝数改变和甲基化模式的影响,与患者的生存预后和免疫特征密切相关,因此具有重要的临床意义。此外,IHC 染色分析、细胞实验和转录组 RNA 测序都提供了证据,支持 C5orf34 在调节细胞周期以促进 LUAD 增殖、迁移和侵袭方面的作用。这凸显了其作为治疗靶点的潜力。这项研究结果表明,C5orf34可作为各种肿瘤类型的重要生物标记物,是免疫疗法的潜在靶点,特别是与LUAD细胞的增殖、迁移和凋亡有关的靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Comprehensive pan-cancer analysis reveals that C5orf34 regulates the proliferation and mortality of lung cancer

The gene C5orf34 exhibits evolutionary conservation among mammals, and emerging evidence suggests its potential involvement in tumor development; however, comprehensive investigations of this gene are lacking. This study aims to elucidate the functional attributes and underlying mechanisms of C5orf34 in cancer. To evaluate its clinical predictive value, we conducted an analysis of the pan-cancerous expression, clinical data, mutation, and methylation data of C5orf34. Additionally, we investigated the correlation between C5orf34 and tumor mutant load (TMB), immune cell infiltration, and microsatellite instability (MSI) through relevant analyses. Furthermore, immunohistochemical (IHC) staining was employed to validate clinical samples, while knockdown and overexpression experiments and transcriptome RNA sequencing were utilized to examine the impact of C5orf34 on LUAD cells. According to our study, C5orf34 exhibits high expression levels in the majority of malignant tumors. The upregulation of C5orf34 is governed by DNA copy number alterations and methylation patterns, and it is closely associated with patients' survival prognosis and immune characteristics, thereby holding significant clinical implications. Furthermore, IHC staining analysis, cellular experiments, and transcriptome RNA sequencing have provided evidence supporting the role of C5orf34 in modulating the cell cycle to promote LUAD proliferation, migration, and invasion. This highlights its potential as a promising therapeutic target. The findings of this investigation suggest that C5orf34 may serve as a valuable biomarker for various tumor types and represent a potential target for immunotherapy, particularly in relation to the proliferation, migration, and apoptosis of LUAD cells.

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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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