{"title":"将香农熵应用于基于利玛窦流的表面索引和极梯度提升,诊断阿尔茨海默病","authors":"Fatemeh Ahmadi, Behroz Bidabad, Mohamad-Ebrahim Shiri, Maral Sedaghat","doi":"10.1016/j.cagd.2024.102364","DOIUrl":null,"url":null,"abstract":"<div><p>Geometric surface models are extensively utilized in brain imaging to analyze and compare three-dimensional anatomical shapes. Due to the intricate nature of the brain surface, rather than examining the entire cortical surface, we are introducing a new set of signatures focused on characteristics of the hippocampal region, which is linked to aspects of Alzheimer's disease. Our approach focuses on Ricci flow as a conformal parameterization method, permitting us to calculate the conformal factor and mean curvature as conformal surface representations to identify distinct regions within a three-dimensional mesh. For the first time for such settings, we propose a simple while elegant formulation by employing the well-established concept of Shannon entropy on these well-known features. This compact while rich feature formulation turns out to lead to an efficient local surface encoding. We are validating its effectiveness through a series of preliminary experiments on 3D MRI data from the Alzheimer's Disease Neuroimaging Initiative (ADNI), with the aim of diagnosing Alzheimer's disease. The feature vectors generated and inputted into the XGBoost classifier demonstrate a remarkable level of accuracy, further emphasizing their potential as a valuable additional measure for surface-based cortical morphometry in Alzheimer's disease research.</p></div>","PeriodicalId":55226,"journal":{"name":"Computer Aided Geometric Design","volume":"113 ","pages":"Article 102364"},"PeriodicalIF":1.3000,"publicationDate":"2024-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Alzheimer's disease diagnosis by applying Shannon entropy to Ricci flow-based surface indexing and extreme gradient boosting\",\"authors\":\"Fatemeh Ahmadi, Behroz Bidabad, Mohamad-Ebrahim Shiri, Maral Sedaghat\",\"doi\":\"10.1016/j.cagd.2024.102364\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Geometric surface models are extensively utilized in brain imaging to analyze and compare three-dimensional anatomical shapes. Due to the intricate nature of the brain surface, rather than examining the entire cortical surface, we are introducing a new set of signatures focused on characteristics of the hippocampal region, which is linked to aspects of Alzheimer's disease. Our approach focuses on Ricci flow as a conformal parameterization method, permitting us to calculate the conformal factor and mean curvature as conformal surface representations to identify distinct regions within a three-dimensional mesh. For the first time for such settings, we propose a simple while elegant formulation by employing the well-established concept of Shannon entropy on these well-known features. This compact while rich feature formulation turns out to lead to an efficient local surface encoding. We are validating its effectiveness through a series of preliminary experiments on 3D MRI data from the Alzheimer's Disease Neuroimaging Initiative (ADNI), with the aim of diagnosing Alzheimer's disease. The feature vectors generated and inputted into the XGBoost classifier demonstrate a remarkable level of accuracy, further emphasizing their potential as a valuable additional measure for surface-based cortical morphometry in Alzheimer's disease research.</p></div>\",\"PeriodicalId\":55226,\"journal\":{\"name\":\"Computer Aided Geometric Design\",\"volume\":\"113 \",\"pages\":\"Article 102364\"},\"PeriodicalIF\":1.3000,\"publicationDate\":\"2024-06-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer Aided Geometric Design\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0167839624000980\",\"RegionNum\":4,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"COMPUTER SCIENCE, SOFTWARE ENGINEERING\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer Aided Geometric Design","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0167839624000980","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, SOFTWARE ENGINEERING","Score":null,"Total":0}
Alzheimer's disease diagnosis by applying Shannon entropy to Ricci flow-based surface indexing and extreme gradient boosting
Geometric surface models are extensively utilized in brain imaging to analyze and compare three-dimensional anatomical shapes. Due to the intricate nature of the brain surface, rather than examining the entire cortical surface, we are introducing a new set of signatures focused on characteristics of the hippocampal region, which is linked to aspects of Alzheimer's disease. Our approach focuses on Ricci flow as a conformal parameterization method, permitting us to calculate the conformal factor and mean curvature as conformal surface representations to identify distinct regions within a three-dimensional mesh. For the first time for such settings, we propose a simple while elegant formulation by employing the well-established concept of Shannon entropy on these well-known features. This compact while rich feature formulation turns out to lead to an efficient local surface encoding. We are validating its effectiveness through a series of preliminary experiments on 3D MRI data from the Alzheimer's Disease Neuroimaging Initiative (ADNI), with the aim of diagnosing Alzheimer's disease. The feature vectors generated and inputted into the XGBoost classifier demonstrate a remarkable level of accuracy, further emphasizing their potential as a valuable additional measure for surface-based cortical morphometry in Alzheimer's disease research.
期刊介绍:
The journal Computer Aided Geometric Design is for researchers, scholars, and software developers dealing with mathematical and computational methods for the description of geometric objects as they arise in areas ranging from CAD/CAM to robotics and scientific visualization. The journal publishes original research papers, survey papers and with quick editorial decisions short communications of at most 3 pages. The primary objects of interest are curves, surfaces, and volumes such as splines (NURBS), meshes, subdivision surfaces as well as algorithms to generate, analyze, and manipulate them. This journal will report on new developments in CAGD and its applications, including but not restricted to the following:
-Mathematical and Geometric Foundations-
Curve, Surface, and Volume generation-
CAGD applications in Numerical Analysis, Computational Geometry, Computer Graphics, or Computer Vision-
Industrial, medical, and scientific applications.
The aim is to collect and disseminate information on computer aided design in one journal. To provide the user community with methods and algorithms for representing curves and surfaces. To illustrate computer aided geometric design by means of interesting applications. To combine curve and surface methods with computer graphics. To explain scientific phenomena by means of computer graphics. To concentrate on the interaction between theory and application. To expose unsolved problems of the practice. To develop new methods in computer aided geometry.