{"title":"使用 GANs 进行跨模态合成数据增强:增强脑磁共振成像和胸部 X 射线分类","authors":"KUNAAL DHAWAN, Siddharth S. Nijhawan","doi":"10.1101/2024.06.09.24308649","DOIUrl":null,"url":null,"abstract":"Brain MRI scans and chest X-ray imaging are pivotal in diagnosing and managing neurological and respiratory diseases, respectively. Given their importance in diagnosis, the datasets to train the artificial intelligence (AI) models for automated diagnosis remain scarce. As an example, annotated chest X-ray datasets, especially those containing rare or abnormal cases like bacterial pneumonia, are scarce. Conventional dataset collection methods are labor-intensive and costly, exacerbating the data scarcity issue. To overcome these challenges, we propose a specialized Generative Adversarial Network (GAN) architecture for generating synthetic chest X-ray data representing healthy lungs and various pneumonia conditions, including viral and bacterial pneumonia. Additionally, we extended our experiments to brain MRI scans by simply swapping the training dataset and demonstrating the power of our GAN approach across different medical imaging contexts. Our method aims to streamline data collection and labeling processes while addressing privacy concerns associated with patient data. We demonstrate the effectiveness of synthetic data in facilitating the development and evaluation of machine learning algorithms, particularly leveraging an EfficientNet v2 model. Through comprehensive experimentation, we evaluate our approach on both real and synthetic datasets, showcasing the potential of synthetic data augmentation in improving disease classification accuracy across diverse pathological conditions. Indeed, the classifier performance when trained with fake + real data on brain MRI classification task shows highest accuracy at 85.9%. Our findings underscore the promising role of synthetic data in advancing automated diagnosis and treatment planning for pneumonia, other respiratory conditions, and brain pathologies.","PeriodicalId":501358,"journal":{"name":"medRxiv - Radiology and Imaging","volume":"142 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Cross-Modality Synthetic Data Augmentation using GANs: Enhancing Brain MRI and Chest X-ray Classification\",\"authors\":\"KUNAAL DHAWAN, Siddharth S. Nijhawan\",\"doi\":\"10.1101/2024.06.09.24308649\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Brain MRI scans and chest X-ray imaging are pivotal in diagnosing and managing neurological and respiratory diseases, respectively. Given their importance in diagnosis, the datasets to train the artificial intelligence (AI) models for automated diagnosis remain scarce. As an example, annotated chest X-ray datasets, especially those containing rare or abnormal cases like bacterial pneumonia, are scarce. Conventional dataset collection methods are labor-intensive and costly, exacerbating the data scarcity issue. To overcome these challenges, we propose a specialized Generative Adversarial Network (GAN) architecture for generating synthetic chest X-ray data representing healthy lungs and various pneumonia conditions, including viral and bacterial pneumonia. Additionally, we extended our experiments to brain MRI scans by simply swapping the training dataset and demonstrating the power of our GAN approach across different medical imaging contexts. Our method aims to streamline data collection and labeling processes while addressing privacy concerns associated with patient data. We demonstrate the effectiveness of synthetic data in facilitating the development and evaluation of machine learning algorithms, particularly leveraging an EfficientNet v2 model. Through comprehensive experimentation, we evaluate our approach on both real and synthetic datasets, showcasing the potential of synthetic data augmentation in improving disease classification accuracy across diverse pathological conditions. Indeed, the classifier performance when trained with fake + real data on brain MRI classification task shows highest accuracy at 85.9%. 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引用次数: 0
摘要
脑磁共振成像扫描和胸部 X 射线成像分别是诊断和管理神经系统疾病和呼吸系统疾病的关键。鉴于它们在诊断中的重要性,用于训练自动诊断人工智能(AI)模型的数据集仍然稀缺。举例来说,带注释的胸部 X 光数据集,尤其是包含细菌性肺炎等罕见或异常病例的数据集非常稀缺。传统的数据集收集方法劳动密集且成本高昂,加剧了数据稀缺问题。为了克服这些挑战,我们提出了一种专门的生成对抗网络(GAN)架构,用于生成代表健康肺部和各种肺炎病症(包括病毒性和细菌性肺炎)的合成胸部 X 光数据。此外,我们通过简单地交换训练数据集,将实验扩展到了脑部核磁共振成像扫描,并展示了我们的 GAN 方法在不同医学成像环境下的强大功能。我们的方法旨在简化数据收集和标记过程,同时解决与患者数据相关的隐私问题。我们展示了合成数据在促进机器学习算法的开发和评估方面的有效性,特别是利用 EfficientNet v2 模型。通过全面的实验,我们在真实数据集和合成数据集上评估了我们的方法,展示了合成数据增强在提高不同病理条件下疾病分类准确性方面的潜力。事实上,在脑核磁共振成像分类任务中,使用虚假数据和真实数据训练的分类器准确率最高,达到 85.9%。我们的研究结果凸显了合成数据在推进肺炎、其他呼吸系统疾病和脑部病变的自动诊断和治疗规划方面的巨大潜力。
Cross-Modality Synthetic Data Augmentation using GANs: Enhancing Brain MRI and Chest X-ray Classification
Brain MRI scans and chest X-ray imaging are pivotal in diagnosing and managing neurological and respiratory diseases, respectively. Given their importance in diagnosis, the datasets to train the artificial intelligence (AI) models for automated diagnosis remain scarce. As an example, annotated chest X-ray datasets, especially those containing rare or abnormal cases like bacterial pneumonia, are scarce. Conventional dataset collection methods are labor-intensive and costly, exacerbating the data scarcity issue. To overcome these challenges, we propose a specialized Generative Adversarial Network (GAN) architecture for generating synthetic chest X-ray data representing healthy lungs and various pneumonia conditions, including viral and bacterial pneumonia. Additionally, we extended our experiments to brain MRI scans by simply swapping the training dataset and demonstrating the power of our GAN approach across different medical imaging contexts. Our method aims to streamline data collection and labeling processes while addressing privacy concerns associated with patient data. We demonstrate the effectiveness of synthetic data in facilitating the development and evaluation of machine learning algorithms, particularly leveraging an EfficientNet v2 model. Through comprehensive experimentation, we evaluate our approach on both real and synthetic datasets, showcasing the potential of synthetic data augmentation in improving disease classification accuracy across diverse pathological conditions. Indeed, the classifier performance when trained with fake + real data on brain MRI classification task shows highest accuracy at 85.9%. Our findings underscore the promising role of synthetic data in advancing automated diagnosis and treatment planning for pneumonia, other respiratory conditions, and brain pathologies.