Mario E. Cancino-Diaz, Fernando Gómez-Chávez, Juan C. Cancino-Diaz
{"title":"表皮葡萄球菌临床和非临床(健康结膜和健康皮肤)分离株中 sar 家族基因的存在和 mRNA 表达情况","authors":"Mario E. Cancino-Diaz, Fernando Gómez-Chávez, Juan C. Cancino-Diaz","doi":"10.1007/s12088-024-01339-x","DOIUrl":null,"url":null,"abstract":"<p><i>Staphylococcus aureus</i> possesses <i>sar</i> family genes, including <i>sar</i>A, S, R, T, U, V, X, Y, Z, and <i>rot</i>, which are transcription factors involved in biofilm formation and quorum sensing. In contrast, <i>Staphylococcus epidermidis</i> has <i>sar</i>A, R, V, X, Y, Z, and <i>rot</i> genes; specifically, SarA, Z, and X are involved in biofilm formation. The expression of the <i>sar</i> family members in <i>S. epidermidis</i> isolated from clinical and non-clinical environments is unknown. This study aimed to establish if clinical and non-clinical isolates of <i>S. epidermidis</i> express the <i>sar</i> family members. We genotyped isolates from clinical ocular infections (n = 52), or non-clinical healthy conjunctiva (n = 40), and healthy skin (n = 50), using multilocus sequence typing (MLST) and the staphylococcal chromosomal cassette <i>mec</i> (SCC<i>mec</i>). We selected strains with different genotypes and representatives of each source of isolation, and the presence of the <i>sar</i> family genes was detected using PCR and RT-qPCR to determine their expression. The <i>sar</i> family genes were present in all selected strains, with no observed differences. The relative expression of the <i>sar</i> family showed that all selected strains expressed each gene weakly, with no significant differences observed between them or between different sources of isolation. In conclusion, the presence and relative expression of the <i>sar</i> family genes are very similar among strains, with no differences based on their origin of isolation and genotype.</p>","PeriodicalId":13316,"journal":{"name":"Indian Journal of Microbiology","volume":"12 1","pages":""},"PeriodicalIF":2.1000,"publicationDate":"2024-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Presence and mRNA Expression of the sar Family Genes in Clinical and Non-clinical (Healthy Conjunctiva and Healthy Skin) Isolates of Staphylococcus epidermidis\",\"authors\":\"Mario E. Cancino-Diaz, Fernando Gómez-Chávez, Juan C. Cancino-Diaz\",\"doi\":\"10.1007/s12088-024-01339-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><i>Staphylococcus aureus</i> possesses <i>sar</i> family genes, including <i>sar</i>A, S, R, T, U, V, X, Y, Z, and <i>rot</i>, which are transcription factors involved in biofilm formation and quorum sensing. In contrast, <i>Staphylococcus epidermidis</i> has <i>sar</i>A, R, V, X, Y, Z, and <i>rot</i> genes; specifically, SarA, Z, and X are involved in biofilm formation. The expression of the <i>sar</i> family members in <i>S. epidermidis</i> isolated from clinical and non-clinical environments is unknown. This study aimed to establish if clinical and non-clinical isolates of <i>S. epidermidis</i> express the <i>sar</i> family members. We genotyped isolates from clinical ocular infections (n = 52), or non-clinical healthy conjunctiva (n = 40), and healthy skin (n = 50), using multilocus sequence typing (MLST) and the staphylococcal chromosomal cassette <i>mec</i> (SCC<i>mec</i>). We selected strains with different genotypes and representatives of each source of isolation, and the presence of the <i>sar</i> family genes was detected using PCR and RT-qPCR to determine their expression. The <i>sar</i> family genes were present in all selected strains, with no observed differences. The relative expression of the <i>sar</i> family showed that all selected strains expressed each gene weakly, with no significant differences observed between them or between different sources of isolation. In conclusion, the presence and relative expression of the <i>sar</i> family genes are very similar among strains, with no differences based on their origin of isolation and genotype.</p>\",\"PeriodicalId\":13316,\"journal\":{\"name\":\"Indian Journal of Microbiology\",\"volume\":\"12 1\",\"pages\":\"\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2024-07-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Indian Journal of Microbiology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s12088-024-01339-x\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Indian Journal of Microbiology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s12088-024-01339-x","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
金黄色葡萄球菌拥有 sar 家族基因,包括 sarA、S、R、T、U、V、X、Y、Z 和 rot,它们是参与生物膜形成和法定量感应的转录因子。相比之下,表皮葡萄球菌则有 sarA、R、V、X、Y、Z 和 rot 基因;其中,SarA、Z 和 X 参与生物膜的形成。从临床和非临床环境中分离出的表皮葡萄球菌中 sar 家族成员的表达情况尚不清楚。本研究旨在确定临床和非临床分离的表皮葡萄球菌是否表达 sar 家族成员。我们使用多焦点序列分型(MLST)和葡萄球菌染色体盒mec(SCCmec)对来自临床眼部感染(n = 52)、非临床健康结膜(n = 40)和健康皮肤(n = 50)的分离株进行了基因分型。我们选择了不同基因型的菌株和每个分离源的代表菌株,并使用 PCR 和 RT-qPCR 检测了 sar 家族基因的存在,以确定其表达情况。所有被选菌株中都存在 sar 家族基因,没有发现差异。sar 家族基因的相对表达表明,所有入选菌株对每个基因的表达都很微弱,没有观察到它们之间或不同分离来源之间的显著差异。总之,sar 家族基因在不同菌株中的存在和相对表达非常相似,没有因分离来源和基因型而产生差异。
Presence and mRNA Expression of the sar Family Genes in Clinical and Non-clinical (Healthy Conjunctiva and Healthy Skin) Isolates of Staphylococcus epidermidis
Staphylococcus aureus possesses sar family genes, including sarA, S, R, T, U, V, X, Y, Z, and rot, which are transcription factors involved in biofilm formation and quorum sensing. In contrast, Staphylococcus epidermidis has sarA, R, V, X, Y, Z, and rot genes; specifically, SarA, Z, and X are involved in biofilm formation. The expression of the sar family members in S. epidermidis isolated from clinical and non-clinical environments is unknown. This study aimed to establish if clinical and non-clinical isolates of S. epidermidis express the sar family members. We genotyped isolates from clinical ocular infections (n = 52), or non-clinical healthy conjunctiva (n = 40), and healthy skin (n = 50), using multilocus sequence typing (MLST) and the staphylococcal chromosomal cassette mec (SCCmec). We selected strains with different genotypes and representatives of each source of isolation, and the presence of the sar family genes was detected using PCR and RT-qPCR to determine their expression. The sar family genes were present in all selected strains, with no observed differences. The relative expression of the sar family showed that all selected strains expressed each gene weakly, with no significant differences observed between them or between different sources of isolation. In conclusion, the presence and relative expression of the sar family genes are very similar among strains, with no differences based on their origin of isolation and genotype.
期刊介绍:
Indian Journal of Microbiology is the official organ of the Association of Microbiologists of India (AMI). It publishes full-length papers, short communication reviews and mini reviews on all aspects of microbiological research, published quarterly (March, June, September and December). Areas of special interest include agricultural, food, environmental, industrial, medical, pharmaceutical, veterinary and molecular microbiology.