用于双簇编辑的改进型核化和固定参数算法

IF 0.9 4区 数学 Q4 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Journal of Combinatorial Optimization Pub Date : 2024-07-03 DOI:10.1007/s10878-024-01186-y
Manuel Lafond
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引用次数: 0

摘要

给定一个双簇图 G,双簇编辑问题要求在 G 中插入或删除最少数量的边,以使每个相连的组件都是双簇,即一个完整的双簇图。这个问题有多种应用,包括生物信息学和社交网络分析。在这项工作中,我们研究了自然参数 k(即允许修改的边的数量)下的参数化复杂性。我们首先证明,我们可以获得一个具有 4.5k 个顶点的核,比之前已知的二次核有所改进。然后,我们提出了一种运行时间为 \(O^*(2.581^k)\)的算法。我们的算法具有概念简单、易于实现的优点。
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Improved kernelization and fixed-parameter algorithms for bicluster editing

Given a bipartite graph G, the Bicluster Editing problem asks for the minimum number of edges to insert or delete in G so that every connected component is a bicluster, i.e. a complete bipartite graph. This has several applications, including in bioinformatics and social network analysis. In this work, we study the parameterized complexity under the natural parameter k, which is the number of allowed modified edges. We first show that one can obtain a kernel with 4.5k vertices, an improvement over the previously known quadratic kernel. We then propose an algorithm that runs in time \(O^*(2.581^k)\). Our algorithm has the advantage of being conceptually simple and should be easy to implement.

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来源期刊
Journal of Combinatorial Optimization
Journal of Combinatorial Optimization 数学-计算机:跨学科应用
CiteScore
2.00
自引率
10.00%
发文量
83
审稿时长
6 months
期刊介绍: The objective of Journal of Combinatorial Optimization is to advance and promote the theory and applications of combinatorial optimization, which is an area of research at the intersection of applied mathematics, computer science, and operations research and which overlaps with many other areas such as computation complexity, computational biology, VLSI design, communication networks, and management science. It includes complexity analysis and algorithm design for combinatorial optimization problems, numerical experiments and problem discovery with applications in science and engineering. The Journal of Combinatorial Optimization publishes refereed papers dealing with all theoretical, computational and applied aspects of combinatorial optimization. It also publishes reviews of appropriate books and special issues of journals.
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