全转录组分析确定了与家蚕雄性不育有关的差异表达 mRNA、miRNA 和 lncRNA。

IF 2.2 2区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Comparative Biochemistry and Physiology D-Genomics & Proteomics Pub Date : 2024-06-27 DOI:10.1016/j.cbd.2024.101280
Tianchen Huang , Shanshan Zhong, Juan Sun, Dongxu Shen, Xuelian Zhang, Qiaoling Zhao
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引用次数: 0

摘要

昆虫不育技术正逐步应用于鳞翅目害虫的防治,而雄性不育的目的基因是该技术的核心。JMS是一种表现雄性不育的突变家蚕,为阐明其形成机制,本研究对JMS及其野生型家蚕化蛹后48 h的睾丸进行了全转录组分析,鉴定出205个DElncRNA、913个mRNA和92个DEmiRNA。对 DEmRNA 的 KEGG 通路富集分析表明,它们参与了氨基酸的生物合成和 ECM 与受体的相互作用。结合ceRNA调控网络KEGG分析表明,从氨基酸的生物合成到蛋白质合成的水解过程,这些通路可能在JMS突变体变体的形成过程中起着至关重要的作用。我们的研究加深了对家蚕雄性不育基因调控网络的理解,也为昆虫不育技术提供了新的视角。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Whole transcriptome analysis identifies differentially expressed mRNA, miRNA and lncRNA associated with male sterility in the silkworm, Bombyx mori

Insect sterility technology is gradually being applied to the control of lepidoptera pests, and the target gene for male sterility is the core of this technology. JMS is a mutant silkworm that exhibits male sterility, and to elucidate its formation mechanism, this study conducted a full transcriptome analysis of the testes of JMS and its wild-type silkworms 48 h after pupation, identifying 205 DElncRNAs, 913 mRNAs, and 92 DEmiRNAs. The KEGG pathway enrichment analysis of the DEmRNAs revealed that they were involved in the biosynthesis of amino acids and ECM-receptor interactions. Combined with ceRNA regulatory network KEGG analysis suggests that pathways from amino acid biosynthesis to hydrolytic processes of protein synthesis may play a crucial role in the formation of JMS mutant variants. Our study deepens our understanding of the regulatory network of male sterility genes in silkworms; it also provides a new perspective for insect sterility technology.

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来源期刊
CiteScore
5.10
自引率
3.30%
发文量
69
审稿时长
33 days
期刊介绍: Comparative Biochemistry & Physiology (CBP) publishes papers in comparative, environmental and evolutionary physiology. Part D: Genomics and Proteomics (CBPD), focuses on “omics” approaches to physiology, including comparative and functional genomics, metagenomics, transcriptomics, proteomics, metabolomics, and lipidomics. Most studies employ “omics” and/or system biology to test specific hypotheses about molecular and biochemical mechanisms underlying physiological responses to the environment. We encourage papers that address fundamental questions in comparative physiology and biochemistry rather than studies with a focus that is purely technical, methodological or descriptive in nature.
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