与本质上无序的蛋白质有关的液-液相分离:实验和计算工具

IF 1.9 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Current protein & peptide science Pub Date : 2024-07-08 DOI:10.2174/0113892037314062240618193044
Orkid Coskuner-Weber, Vladimir N Uversky
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引用次数: 0

摘要

液-液相分离(LLPS)现象是生物大分子空间组织的重要机制,对细胞环境中的基本过程有重大影响。本质无序蛋白质或具有本质无序区域的蛋白质在推动这一生物物理过程中起着关键作用,从而决定了非膜状细胞区的形成。有令人信服的证据表明,LLPS 的畸变与各种神经退行性疾病的发病机制有关,无序蛋白容易形成病理聚集体,这一点尤为突出。本研究对当代实验和计算方法进行了细致的评估,这些方法专门用于在 LLPS 的背景下对固有紊乱蛋白进行研究。通过对这些研究技术的能力和限制进行辨析,我们揭示了这些无处不在的蛋白质对 LLPS 和神经退行性病变的复杂贡献。此外,我们还预测了这一领域的未来发展轨迹,探讨了创新性研究工具及其在阐明 LLPS 潜在机制方面的潜力,最终目标是为抗击神经退行性疾病开辟新的治疗途径。
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Liquid-Liquid Phase Separation Associated with Intrinsically Disordered Proteins: Experimental and Computational Tools.

The phenomenon of Liquid-Liquid Phase Separation (LLPS) serves as a vital mechanism for the spatial organization of biomolecules, significantly influencing the elementary processes within the cellular milieu. Intrinsically disordered proteins, or proteins endowed with intrinsically disordered regions, are pivotal in driving this biophysical process, thereby dictating the formation of non-membranous cellular compartments. Compelling evidence has linked aberrations in LLPS to the pathogenesis of various neurodegenerative diseases, underscored by the disordered proteins' proclivity to form pathological aggregates. This study meticulously evaluates the arsenal of contemporary experimental and computational methodologies dedicated to the examination of intrinsically disordered proteins within the context of LLPS. Through a discerning discourse on the capabilities and constraints of these investigative techniques, we unravel the intricate contributions of these ubiquitous proteins to LLPS and neurodegeneration. Moreover, we project a future trajectory for the field, contemplating on innovative research tools and their potential to elucidate the underlying mechanisms of LLPS, with the ultimate goal of fostering new therapeutic avenues for combating neurodegenerative disorders.

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来源期刊
Current protein & peptide science
Current protein & peptide science 生物-生化与分子生物学
CiteScore
5.20
自引率
0.00%
发文量
73
审稿时长
6 months
期刊介绍: Current Protein & Peptide Science publishes full-length/mini review articles on specific aspects involving proteins, peptides, and interactions between the enzymes, the binding interactions of hormones and their receptors; the properties of transcription factors and other molecules that regulate gene expression; the reactions leading to the immune response; the process of signal transduction; the structure and function of proteins involved in the cytoskeleton and molecular motors; the properties of membrane channels and transporters; and the generation and storage of metabolic energy. In addition, reviews of experimental studies of protein folding and design are given special emphasis. Manuscripts submitted to Current Protein and Peptide Science should cover a field by discussing research from the leading laboratories in a field and should pose questions for future studies. Original papers, research articles and letter articles/short communications are not considered for publication in Current Protein & Peptide Science.
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