His-MMDM:利用扩散模型对组织病理学图像进行多域和多组学转换

Zhongxiao Li, Tianqi Su, Bin Zhang, Wenkai Han, Sibin Zhang, Guiyin Sun, Yuwei Cong, Xin Chen, Jiping Qi, Yujie Wang, Shiguang Zhao, Hongxue Meng, Peng Liang, Xin Gao
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摘要

生成式人工智能(GenAI)通过各种图像转换模型推动了计算病理学的发展。这些模型能从现有图像中合成组织病理学图像,从而为颜色归一化和虚拟染色等任务提供便利。目前的模型虽然有效,但大多专用于特定的源-目标域对,缺乏多域翻译的可扩展性。在此,我们介绍基于扩散模型的框架 His-MMDM,该框架可实现多领域和多组学组织病理学图像翻译。His-MMDM 可以跨无限数量的分类域翻译图像,从而实现新的应用,如跨各种肿瘤类型翻译肿瘤图像,同时在将冷冻切片图像转换为福尔马林固定石蜡包埋(FFPE)图像等以往任务上的表现可与专用模型相媲美。此外,它还能对组织病理学图像进行基因组学和/或转录组学指导的编辑,说明驱动突变和致癌通路改变对组织病理学的影响。这些多功能使 His-MMDM 成为未来病理学家 GenAI 工具包中的一个通用工具。
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His-MMDM: Multi-domain and Multi-omics Translation of Histopathology Images with Diffusion Models
Generative AI (GenAI) has advanced computational pathology through various image translation models. These models synthesize histopathological images from existing ones, facilitating tasks such as color normalization and virtual staining. Current models, while effective, are mostly dedicated to specific source-target domain pairs and lack scalability for multi-domain translations. Here we introduce His-MMDM, a diffusion model-based framework enabling multi-domain and multi-omics histopathological image translation. His-MMDM can translate images across an unlimited number of categorical domains, enabling new applications like the translation of tumor images across various tumor types, while performing comparably to dedicated models on previous tasks such as transforming cryosectioned images to formalin-fixed paraffin-embedded (FFPE) ones. Additionally, it can perform genomics- and/or transcriptomics-guided editing of histopathological images, illustrating the impact of driver mutations and oncogenic pathway alterations on tissue histopathology. These versatile capabilities position His-MMDM as a versatile tool in the GenAI toolkit for future pathologists.
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