用于 2 型糖尿病治疗的植物化学物质的分子对接:网络药理学方法

IF 1.5 Q3 MEDICINE, RESEARCH & EXPERIMENTAL International Journal of Molecular and Cellular Medicine Pub Date : 2023-01-01 DOI:10.22088/IJMCM.BUMS.12.4.372
Sooriyakala Rani Sri Prakash, Sree Meenakshi Kamalnath, Arul Jayanthi Antonisamy, Sivasankari Marimuthu, Sankar Malayandi
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引用次数: 0

摘要

鉴定草药中的潜在先导分子不仅对验证至关重要,而且对药物发现也至关重要。本研究的重点是利用网络药理学和对接研究确定 10 种用于治疗 2 型糖尿病(T2DM)的常见草药的治疗机制。药用植物及其植物成分的详细信息分别来自印度药用植物、植物化学和治疗学以及杜克博士数据库。使用 MolSoft 软件评估其药物相似性。使用 Swiss TargetPrediction 和 GeneCards 分别预测了筛选出的植物化学物质的蛋白质靶点和 T2DM 中涉及的靶基因列表。STRING、Cytoscape、Database for Annotation, Visualization, and Integrated Discovery和PyRx分别用于网络构建、网络分析、基因本体分析和分子对接。结果发现,蛋白靶标 MAPK1、AKT1、PI3K 和表皮生长因子受体(EGFR)在 T2DM 的进展中起着关键作用。此外,分子对接表明,宁巴黄酮与 MAPK1(-8.7 kcal/mole)和 PI3K(-9.6 kcal/mole)的结合亲和力较高,而芦丁和 10-hydroxyaloin-B 则分别与 AKT1(-7.4 kcal/mole)和 EGFR(-8.1 kcal/mole)的结合亲和力较高。这项研究的结果表明,黄酮类化合物是通过与 MAPK 和 PI3K-AKT 信号通路相关的关键蛋白分子相互作用而显示抗糖尿病活性的主要植物成分,从而有助于治疗 T2DM。这些途径的激活会改变 Ras-GTPase 的活性,并增强葡萄糖转运体 GLUT4 的表达,从而导致从血液中摄取葡萄糖。
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In Silico Molecular Docking of Phytochemicals for Type 2 Diabetes Mellitus Therapy: A Network Pharmacology Approach.

Identification of potential lead molecules in herbal medicines is crucial not only for validation but also for drug discovery. This study was focused on identifying the therapeutic mechanisms of 10 common herbs used to treat type 2 diabetes mellitus (T2DM) using network pharmacology and docking studies. Details pertaining to medicinal plants and their phytoconstituents were obtained from Indian Medicinal Plants, Phytochemistry, and Therapeutics and Dr. Duke's database, respectively. MolSoft was used to assess their drug likeness. Prediction of protein targets for the screened phytochemicals and the list of target genes involved in T2DM were obtained using Swiss TargetPrediction and GeneCards respectively. STRING; Cytoscape; Database for Annotation, Visualization, and Integrated Discovery; and PyRx were used for network construction, network analysis, gene ontology analysis, and molecular docking, respectively. The protein targets MAPK1, AKT1, PI3K, and EGFR were identified to play a crucial role in the progression of T2DM. Furthermore, molecular docking indicated that nimbaflavone exhibited high binding affinities for MAPK1 (-8.7 kcal/mole) and PI3K (-9.6 kcal/mole), whereas rutin and 10-hydroxyaloin-B showed high binding affinities for AKT1 (-7.4 kcal/mole) and EGFR (-8.1 kcal/mole), respectively. The findings from this study suggest that flavonoids are the major phytoconstituents that display antidiabetic activity by interacting with key protein molecules related to the MAPK and PI3K-AKT signaling pathways, thereby aiding in the treatment of T2DM. The activation of these pathways alters Ras-GTPase activity and enhances the expression of GLUT4, a glucose transporter, resulting in the uptake of glucose from the bloodstream.

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期刊介绍: The International Journal of Molecular and Cellular Medicine (IJMCM) is a peer-reviewed, quarterly publication of Cellular and Molecular Biology Research Center (CMBRC), Babol University of Medical Sciences, Babol, Iran. The journal covers all cellular & molecular biology and medicine disciplines such as the genetic basis of disease, biomarker discovery in diagnosis and treatment, genomics and proteomics, bioinformatics, computer applications in human biology, stem cells and tissue engineering, medical biotechnology, nanomedicine, cellular processes related to growth, death and survival, clinical biochemistry, molecular & cellular immunology, molecular and cellular aspects of infectious disease and cancer research. IJMCM is a free access journal. All open access articles published in IJMCM are distributed under the terms of the Creative Commons Attribution CC BY. The journal doesn''t have any submission and article processing charges (APCs).
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