揭示基因-miRNA 和药物在头颈癌中的免疫治疗潜力的机制

Pharmaceuticals Pub Date : 2024-07-10 DOI:10.3390/ph17070921
Danishuddin, Md Azizul Haque, M. Z. Malik, Rakesh Arya, Pooja Singh, Jeong-Sang Lee, Jong-Joo Kim, Keun-Woo Lee, T. Jung
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引用次数: 0

摘要

头颈部癌症是全球第六大常见恶性肿瘤,死亡率和复发率都很高。研究表明,分子诊断在这些疾病的早期检测和预后评估中起着至关重要的作用。本研究旨在确定头颈癌的潜在生物标志物,并阐明它们与 miRNAs 和可能的治疗药物之间的相互作用。研究采用网络生物学和机器学习方法确定了四个驱动因子,即 FN1、IL1A、COL1A1 和 MMP9。基因组变异分析(GSVA)显示,这些基因显著参与了不同的生物过程和通路,包括凝血、紫外线反应下降、细胞凋亡、NOTCH 信号转导、Wnt-β catenin 和其他信号通路。利用接收者操作特征曲线(ROC)验证了这些枢纽基因的诊断价值。互动性最强的 miRNA,包括 miR-128-3p、miR-218-5p、miR-214-3p、miR-124-3p、miR-129-2-3p 和 miR-1-3p,都是针对关键基因的。此外,还发现了关键基因与药物之间的相互作用。总之,本研究报告的关键基因和 miRNA 或药物可能为潜在的生物标志物提供有价值的信息,从而提高头颈癌的预后和诊断率。
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Unveiling the Mechanisms Underlying the Immunotherapeutic Potential of Gene–miRNA and Drugs in Head and Neck Cancer
Head and neck cancer ranks as the sixth-most common malignancy worldwide, characterized by high mortality and recurrence rates. Research studies indicate that molecular diagnostics play a crucial role in the early detection and prognostic evaluation of these diseases. This study aimed to identify potential biomarkers for head and neck cancer and elucidate their interactions with miRNAs and possible therapeutic drugs. Four drivers, namely, FN1, IL1A, COL1A1, and MMP9, were identified using network biology and machine learning approaches. Gene set variation analysis (GSVA) showed that these genes were significantly involved in different biological processes and pathways, including coagulation, UV-response-down, apoptosis, NOTCH signaling, Wnt-beta catenin, and other signal pathways. The diagnostic value of these hub genes was validated using receiver operating characteristic (ROC) curves. The top interactive miRNAs, including miR-128-3p, miR-218-5p, miR-214-3p, miR-124-3p, miR-129-2-3p, and miR-1-3p, targeted the key genes. Furthermore, the interaction between the key genes and drugs was also identified. In summary, the key genes and miRNAs or drugs reported in this study might provide valuable information for potential biomarkers to increase the prognosis and diagnosis of head and neck cancer.
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