机器学习和磁共振图像纹理分析可预测患有和未患有慢性阻塞性肺病的戒烟者肺功能的加速衰退。

IF 1.9 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Journal of Medical Imaging Pub Date : 2024-07-01 Epub Date: 2024-07-19 DOI:10.1117/1.JMI.11.4.046001
Maksym Sharma, Miranda Kirby, Aaron Fenster, David G McCormack, Grace Parraga
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We hypothesized that hyperpolarized gas MRI ventilation, machine-learning, and multivariate modeling could be combined to predict clinically-relevant changes in forced expiratory volume in 1 s ( <math> <mrow><msub><mi>FEV</mi> <mn>1</mn></msub> </mrow> </math> ) across 3 years.</p><p><strong>Approach: </strong>Hyperpolarized <math> <mrow> <mmultiscripts><mrow><mi>He</mi></mrow> <mprescripts></mprescripts> <none></none> <mrow><mn>3</mn></mrow> </mmultiscripts> </mrow> </math> MRI was acquired using a coronal Cartesian fast gradient recalled echo sequence with a partial echo and segmented using a k-means clustering algorithm. A maximum entropy mask was used to generate a region-of-interest for texture feature extraction using a custom-developed algorithm and the PyRadiomics platform. The principal component and Boruta analyses were used for feature selection. 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引用次数: 0

摘要

目的:我们的目标是在超极化 He 3 磁共振成像(MRI)数据集上训练机器学习算法,以生成患有或未患有慢性阻塞性肺病的参与者肺功能加速下降的模型。我们假设将超极化气体磁共振成像通气、机器学习和多元建模结合起来,可以预测1秒内用力呼气容积(FEV 1)在3年内与临床相关的变化:方法:使用冠状笛卡尔快速梯度回波序列和部分回波采集超极化 He 3 MRI,并使用 k-means 聚类算法进行分割。使用定制开发的算法和 PyRadiomics 平台,用最大熵掩模生成纹理特征提取的感兴趣区。主成分分析和博鲁塔分析用于特征选择。使用接收器下区域操作曲线和灵敏度-特异性分析对基于集合的分类器和单一机器学习分类器进行了评估:我们评估了 88 名戒烟者 31 ± 7 个月的随访数据,其中 57 名戒烟者(22 名女性/35 名男性,70 ± 9 岁)的 FEV 1 变化可忽略不计,31 名戒烟者(7 名女性/24 名男性,68 ± 9 岁)的 FEV 1 恶化≥ 60 mL /年。此外,3/88 的戒烟者报告吸烟状态发生了变化。我们利用人口统计学、肺活量测定和纹理特征生成了机器学习模型来预测 FEV 1 的下降,其中后者的分类准确率最高,达到 81%。综合模型(根据所有可用的测量结果进行训练)达到了 82% 的总体最佳分类准确率;但是,它与仅根据磁共振成像纹理特征训练的模型没有显著差异:我们首次利用超极化 He 3 磁共振成像通气纹理特征和机器学习来识别 FEV 1 加速下降的戒烟者,准确率高达 82%。
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Machine learning and magnetic resonance image texture analysis predicts accelerated lung function decline in ex-smokers with and without chronic obstructive pulmonary disease.

Purpose: Our objective was to train machine-learning algorithms on hyperpolarized He 3 magnetic resonance imaging (MRI) datasets to generate models of accelerated lung function decline in participants with and without chronic-obstructive-pulmonary-disease. We hypothesized that hyperpolarized gas MRI ventilation, machine-learning, and multivariate modeling could be combined to predict clinically-relevant changes in forced expiratory volume in 1 s ( FEV 1 ) across 3 years.

Approach: Hyperpolarized He 3 MRI was acquired using a coronal Cartesian fast gradient recalled echo sequence with a partial echo and segmented using a k-means clustering algorithm. A maximum entropy mask was used to generate a region-of-interest for texture feature extraction using a custom-developed algorithm and the PyRadiomics platform. The principal component and Boruta analyses were used for feature selection. Ensemble-based and single machine-learning classifiers were evaluated using area-under-the-receiver-operator-curve and sensitivity-specificity analysis.

Results: We evaluated 88 ex-smoker participants with 31 ± 7 months follow-up data, 57 of whom (22 females/35 males, 70 ± 9 years) had negligible changes in FEV 1 and 31 participants (7 females/24 males, 68 ± 9 years) with worsening FEV 1 60    mL / year . In addition, 3/88 ex-smokers reported a change in smoking status. We generated machine-learning models to predict FEV 1 decline using demographics, spirometry, and texture features, with the later yielding the highest classification accuracy of 81%. The combined model (trained on all available measurements) achieved the overall best classification accuracy of 82%; however, it was not significantly different from the model trained on MRI texture features alone.

Conclusion: For the first time, we have employed hyperpolarized He 3 MRI ventilation texture features and machine-learning to identify ex-smokers with accelerated decline in FEV 1 with 82% accuracy.

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来源期刊
Journal of Medical Imaging
Journal of Medical Imaging RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING-
CiteScore
4.10
自引率
4.20%
发文量
0
期刊介绍: JMI covers fundamental and translational research, as well as applications, focused on medical imaging, which continue to yield physical and biomedical advancements in the early detection, diagnostics, and therapy of disease as well as in the understanding of normal. The scope of JMI includes: Imaging physics, Tomographic reconstruction algorithms (such as those in CT and MRI), Image processing and deep learning, Computer-aided diagnosis and quantitative image analysis, Visualization and modeling, Picture archiving and communications systems (PACS), Image perception and observer performance, Technology assessment, Ultrasonic imaging, Image-guided procedures, Digital pathology, Biomedical applications of biomedical imaging. JMI allows for the peer-reviewed communication and archiving of scientific developments, translational and clinical applications, reviews, and recommendations for the field.
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