{"title":"带有突变和选择的赖特-费舍模型的精确路径积分表示法","authors":"David Waxman","doi":"arxiv-2407.12548","DOIUrl":null,"url":null,"abstract":"The Wright-Fisher model describes a biological population containing a finite\nnumber of individuals. In this work we consider a Wright-Fisher model for a\nrandomly mating population, where selection and mutation act at an unlinked\nlocus. The selection acting has a general form, and the locus may have two or\nmore alleles. We determine an exact representation of the time dependent\ntransition probability of such a model in terms of a path integral. Path\nintegrals were introduced in physics and mathematics, and have found numerous\napplications in different fields, where a probability distribution, or closely\nrelated object, is represented as a 'sum' of contributions over all paths or\ntrajectories between two points. Path integrals provide alternative\ncalculational routes to problems, and may be a source of new intuition and\nsuggest new approximations. For the case of two alleles, we relate the exact\nWright-Fisher path-integral result to the path-integral form of the transition\ndensity under the diffusion approximation. We determine properties of the\nWright-Fisher transition probability for multiple alleles. We show how, in the\nabsence of mutation, the Wright-Fisher transition probability incorporates\nphenomena such as fixation and loss.","PeriodicalId":501044,"journal":{"name":"arXiv - QuanBio - Populations and Evolution","volume":"34 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Exact path-integral representation of the Wright-Fisher model with mutation and selection\",\"authors\":\"David Waxman\",\"doi\":\"arxiv-2407.12548\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The Wright-Fisher model describes a biological population containing a finite\\nnumber of individuals. In this work we consider a Wright-Fisher model for a\\nrandomly mating population, where selection and mutation act at an unlinked\\nlocus. The selection acting has a general form, and the locus may have two or\\nmore alleles. We determine an exact representation of the time dependent\\ntransition probability of such a model in terms of a path integral. Path\\nintegrals were introduced in physics and mathematics, and have found numerous\\napplications in different fields, where a probability distribution, or closely\\nrelated object, is represented as a 'sum' of contributions over all paths or\\ntrajectories between two points. Path integrals provide alternative\\ncalculational routes to problems, and may be a source of new intuition and\\nsuggest new approximations. For the case of two alleles, we relate the exact\\nWright-Fisher path-integral result to the path-integral form of the transition\\ndensity under the diffusion approximation. We determine properties of the\\nWright-Fisher transition probability for multiple alleles. We show how, in the\\nabsence of mutation, the Wright-Fisher transition probability incorporates\\nphenomena such as fixation and loss.\",\"PeriodicalId\":501044,\"journal\":{\"name\":\"arXiv - QuanBio - Populations and Evolution\",\"volume\":\"34 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-07-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Populations and Evolution\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2407.12548\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Populations and Evolution","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2407.12548","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Exact path-integral representation of the Wright-Fisher model with mutation and selection
The Wright-Fisher model describes a biological population containing a finite
number of individuals. In this work we consider a Wright-Fisher model for a
randomly mating population, where selection and mutation act at an unlinked
locus. The selection acting has a general form, and the locus may have two or
more alleles. We determine an exact representation of the time dependent
transition probability of such a model in terms of a path integral. Path
integrals were introduced in physics and mathematics, and have found numerous
applications in different fields, where a probability distribution, or closely
related object, is represented as a 'sum' of contributions over all paths or
trajectories between two points. Path integrals provide alternative
calculational routes to problems, and may be a source of new intuition and
suggest new approximations. For the case of two alleles, we relate the exact
Wright-Fisher path-integral result to the path-integral form of the transition
density under the diffusion approximation. We determine properties of the
Wright-Fisher transition probability for multiple alleles. We show how, in the
absence of mutation, the Wright-Fisher transition probability incorporates
phenomena such as fixation and loss.