将巨型芽孢杆菌与 CMOS 技术相结合的可现场部署的砷传感器

Chelsea Y. Hu, John B. McManus, Fatemeh Aghlmand, Elin M Larsson, Azita Emami, Richard M Murray
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摘要

细菌通过动态调节基因表达以应对不断变化的环境,从而对其所处环境进行天生的监控。通过合成生物学,我们可以利用这种天然能力来设计基于细胞的传感器。巨型芽孢杆菌(Bacillus megaterium)是一种土壤细菌,因其卓越的重金属耐受性和孢子繁殖能力而脱颖而出,成为以较低运输成本进行重金属检测的理想候选菌株。然而,挑战依然存在:针对这种菌株的合成生物学工具包尚不发达,传统的全细胞传感器需要专业的实验室设备才能读取输出结果。在我们的研究中,我们对巨型酵母菌进行了基因改造,使其能够检测砷,并以无性细胞和孢子两种形式确定了低于美国环保局建议的 10 ppb 饮用水检测阈值。此外,我们还将工程化的巨杆菌活细胞和孢子与 CMOS 芯片集成,用于现场部署砷检测。我们的研究表明,我们的集成传感器的检测限适用于土壤和空气砷污染检测。作为概念验证,这项工作为在资源有限的环境中部署我们的传感器铺平了道路,确保在具有挑战性的环境中进行实时砷检测。
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A Field-Deployable Arsenic Sensor Integrating Bacillus Megaterium with CMOS Technology
Bacteria innately monitor their environment by dynamically regulating gene expression to respond to fluctuating conditions. Through synthetic biology, we can harness this natural capability to design cell-based sensors. Bacillus megaterium, a soil bacterium, stands out due to its remarkable heavy metal tolerance and sporulation ability, making it an ideal candidate for heavy metal detection with low transportation costs. However, challenges persist: the synthetic biology toolkit for this strain is underdeveloped and conventional whole-cell sensors necessitate specialized laboratory equipment to read the output. In our study, we genetically modified B. megaterium for arsenic detection, establishing a detection threshold below the EPA recommendation of 10 ppb for drinking water in both vegetative cell form and spore form. Additionally, we integrated both engineered B. megaterium living cells and spores with CMOS chip for field-deployable arsenic detection. We show that the limit of detection of our integrated sensor is applicable in soil and air arsenic contamination testing. As a proof of concept, this work paves the way for deploying our sensor in resource-limited settings, ensuring real-time arsenic detection in challenging environments.
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