从珠江口分离的两种新型黄杆菌--Flavobacterium adhaerens sp.nov.和Flavobacterium maritimum sp.nov.。

IF 2.3 3区 生物学 Q4 MICROBIOLOGY International journal of systematic and evolutionary microbiology Pub Date : 2024-07-01 DOI:10.1099/ijsem.0.006471
Zi-Qi Peng, Jia-Ling Li, Zi-Wen Yang, Pan-Deng Wang, Dan-Yuan Guo, Xiao-Qing Luo, Qi-Qi Deng, Qi Li, Ting-Ting She, Wen-Jun Li
{"title":"从珠江口分离的两种新型黄杆菌--Flavobacterium adhaerens sp.nov.和Flavobacterium maritimum sp.nov.。","authors":"Zi-Qi Peng, Jia-Ling Li, Zi-Wen Yang, Pan-Deng Wang, Dan-Yuan Guo, Xiao-Qing Luo, Qi-Qi Deng, Qi Li, Ting-Ting She, Wen-Jun Li","doi":"10.1099/ijsem.0.006471","DOIUrl":null,"url":null,"abstract":"<p><p>Two strains, designated as SYSU M80004<sup>T</sup> and SYSU M80005<sup>T</sup>, were isolated from water sampled in the Pearl River Estuary, Guangzhou, Guangdong, PR China. The strains were Gram-stain-negative and aerobic. Strain SYSU M80004<sup>T</sup> could grow at pH 6.0-8.0 (optimum, pH 7.0), 22-30 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0 %). Strain SYSU M80005<sup>T</sup> could grow at pH 6.0-8.0 (optimum, pH 7.0), 4-37 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0%). Both strains contained MK-6 as the predominant menaquinone. C<sub>16 : 0</sub> and iso-C<sub>15 : 0</sub> were identified as the major fatty acids (>10 %) of strain SYSU M80004<sup>T</sup> while strain SYSU M80005<sup>T</sup> contained iso-C<sub>15 : 0</sub> and iso-C<sub>17 : 0</sub> 3-OH as major fatty acids. Phosphatidylethanolamine was present as the major polar lipid in both strains. The average nucleotide identity and digital DNA-DNA hybridization values between these two strains and their closest relatives were 73.5-79.3 % and 19.6-23.2 %, respectively. Phylogenetic analysis based on the 16S rRNA gene and genomic sequences indicated they belonged to the genus <i>Flavobacterium</i>. Therefore, on the basis of phenotypic, physiological, chemotaxonomic and genomic evidence, two novel species, <i>Flavobacterium adhaerens</i> sp. nov. (type strain=SYSU M80004<sup>T</sup>=CDMCC 1.4522<sup>T</sup>=KCTC 102268<sup>T</sup>) and <i>Flavobacterium maritimum</i> sp. nov. (type strain=SYSU M80005<sup>T</sup>=CGMCC 1.4523<sup>T</sup>= KCTC 102269<sup>T</sup>) are proposed.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"74 7","pages":""},"PeriodicalIF":2.3000,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Flavobacterium adhaerens</i> sp. nov. and <i>Flavobacterium maritimum</i> sp. nov., two novel flavobacteria isolated from the Pearl River Estuary.\",\"authors\":\"Zi-Qi Peng, Jia-Ling Li, Zi-Wen Yang, Pan-Deng Wang, Dan-Yuan Guo, Xiao-Qing Luo, Qi-Qi Deng, Qi Li, Ting-Ting She, Wen-Jun Li\",\"doi\":\"10.1099/ijsem.0.006471\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Two strains, designated as SYSU M80004<sup>T</sup> and SYSU M80005<sup>T</sup>, were isolated from water sampled in the Pearl River Estuary, Guangzhou, Guangdong, PR China. The strains were Gram-stain-negative and aerobic. Strain SYSU M80004<sup>T</sup> could grow at pH 6.0-8.0 (optimum, pH 7.0), 22-30 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0 %). Strain SYSU M80005<sup>T</sup> could grow at pH 6.0-8.0 (optimum, pH 7.0), 4-37 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0%). Both strains contained MK-6 as the predominant menaquinone. C<sub>16 : 0</sub> and iso-C<sub>15 : 0</sub> were identified as the major fatty acids (>10 %) of strain SYSU M80004<sup>T</sup> while strain SYSU M80005<sup>T</sup> contained iso-C<sub>15 : 0</sub> and iso-C<sub>17 : 0</sub> 3-OH as major fatty acids. Phosphatidylethanolamine was present as the major polar lipid in both strains. The average nucleotide identity and digital DNA-DNA hybridization values between these two strains and their closest relatives were 73.5-79.3 % and 19.6-23.2 %, respectively. Phylogenetic analysis based on the 16S rRNA gene and genomic sequences indicated they belonged to the genus <i>Flavobacterium</i>. Therefore, on the basis of phenotypic, physiological, chemotaxonomic and genomic evidence, two novel species, <i>Flavobacterium adhaerens</i> sp. nov. (type strain=SYSU M80004<sup>T</sup>=CDMCC 1.4522<sup>T</sup>=KCTC 102268<sup>T</sup>) and <i>Flavobacterium maritimum</i> sp. nov. (type strain=SYSU M80005<sup>T</sup>=CGMCC 1.4523<sup>T</sup>= KCTC 102269<sup>T</sup>) are proposed.</p>\",\"PeriodicalId\":14390,\"journal\":{\"name\":\"International journal of systematic and evolutionary microbiology\",\"volume\":\"74 7\",\"pages\":\"\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2024-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International journal of systematic and evolutionary microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006471\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006471","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

从中国广东省广州市珠江口的水样中分离出两株菌株,分别命名为 SYSU M80004T 和 SYSU M80005T。这两株菌株均为革兰氏阴性需氧菌。SYSU M80004T 菌株可在 pH 值为 6.0-8.0(最适 pH 值为 7.0)、温度为 22-30℃(最适温度为 28℃)、氯化钠含量为 0-1%(重量/体积,最适含量为 0%)的条件下生长。SYSU M80005T 菌株可在 pH 值为 6.0-8.0(最适 pH 值为 7.0)、温度为 4-37℃(最适温度为 28℃)和氯化钠含量为 0-1 %(重量比;最适含量为 0%)的条件下生长。两种菌株都含有 MK-6 作为主要的脑醌。C16 :0 和异 C15 :经鉴定,SYSU M80004T 菌株的主要脂肪酸(>10 %)为 C16 : 0 和异 C15 : 0,而 SYSU M80005T 菌株则含有异 C15 :0 和异 C17 :0 3-OH 为主要脂肪酸。磷脂酰乙醇胺是两种菌株的主要极性脂质。这两个菌株与其近亲的平均核苷酸相同度和数字 DNA-DNA 杂交值分别为 73.5-79.3 % 和 19.6-23.2 %。基于 16S rRNA 基因和基因组序列的系统进化分析表明,它们属于黄杆菌属。因此,根据表型学、生理学、化学分类学和基因组学证据,提出了两个新物种:Flavobacterium adhaerens sp.
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Flavobacterium adhaerens sp. nov. and Flavobacterium maritimum sp. nov., two novel flavobacteria isolated from the Pearl River Estuary.

Two strains, designated as SYSU M80004T and SYSU M80005T, were isolated from water sampled in the Pearl River Estuary, Guangzhou, Guangdong, PR China. The strains were Gram-stain-negative and aerobic. Strain SYSU M80004T could grow at pH 6.0-8.0 (optimum, pH 7.0), 22-30 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0 %). Strain SYSU M80005T could grow at pH 6.0-8.0 (optimum, pH 7.0), 4-37 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0%). Both strains contained MK-6 as the predominant menaquinone. C16 : 0 and iso-C15 : 0 were identified as the major fatty acids (>10 %) of strain SYSU M80004T while strain SYSU M80005T contained iso-C15 : 0 and iso-C17 : 0 3-OH as major fatty acids. Phosphatidylethanolamine was present as the major polar lipid in both strains. The average nucleotide identity and digital DNA-DNA hybridization values between these two strains and their closest relatives were 73.5-79.3 % and 19.6-23.2 %, respectively. Phylogenetic analysis based on the 16S rRNA gene and genomic sequences indicated they belonged to the genus Flavobacterium. Therefore, on the basis of phenotypic, physiological, chemotaxonomic and genomic evidence, two novel species, Flavobacterium adhaerens sp. nov. (type strain=SYSU M80004T=CDMCC 1.4522T=KCTC 102268T) and Flavobacterium maritimum sp. nov. (type strain=SYSU M80005T=CGMCC 1.4523T= KCTC 102269T) are proposed.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
期刊最新文献
Metabacillus harenarius sp. nov., an alginate lyase-producing bacterium, and reclassification of 'Bacillus weihaiensis'. Nitrosomonas domestica sp. nov. and Nitrosomonas limosa sp. nov., two ammonia-oxidizing bacteria from domestic wastewater and activated sludge. Legionella stuttgartensis sp. nov. and Legionella nigrisilvae sp. nov., two new species isolated from a re-cooling plant and from a drinking water house installation in southern Germany. Salegentibacter profundi sp. nov. and Salegentibacter haimaensis sp. nov., isolated from deep-sea cold seep sediments of the South China Sea. Emended description of the genus Rhizobacter and reclassification of Ideonella sakaiensis as Pseudideonella sakaiensis gen. nov., comb. nov.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1