利用 GC-MS 技术分析干旱胁迫下四季豆的代谢谱和生物标记物

IF 3.5 3区 医学 Q2 ENDOCRINOLOGY & METABOLISM Metabolomics Pub Date : 2024-07-27 DOI:10.1007/s11306-024-02143-w
Shipra Sharma, Mukund Kumar, Debabrata Sircar, Ramasare Prasad
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引用次数: 0

摘要

引言 四季豆是一种具有重要经济价值的一年生豆科植物,被广泛称为瓜尔豆。方法 采用气相色谱-质谱(GC-MS)技术分析非目标代谢物。结果经干旱处理的四季豆品种'HG-365'的成熟叶片显示,GC-MS 代谢组分析识别出的主要代谢物有各种氨基酸、脂肪酸、糖醇和糖类。瓜尔叶片的代谢物分析显示有 23 种代谢物发生了变化。VIP得分大于1的8种代谢物(脯氨酸、缬氨酸、D-松醇、棕榈酸、十二酸、苏氨酸、葡萄糖和单硬脂酸甘油酯)被认为是生物标记物,其中3种代谢物生物标记物(D-松醇、缬氨酸和单硬脂酸甘油酯)是首次在干旱胁迫下的瓜尔中发现。本研究还研究了四种氨基酸(丙氨酸、缬氨酸、丝氨酸和天冬氨酸),它们在瓜尔胶的抗旱途径中发挥了重要作用。这项工作深入详细地介绍了瓜尔豆的非靶向干旱响应代谢物和生物标记物,可用于进一步鉴定干旱胁迫下的生化途径、酶和各种基因的位置。
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Metabolic profiling and biomarkers identification in cluster bean under drought stress using GC-MS technique

Introduction

The Cluster bean is an economically significant annual legume, widely known as guar. Plant productivity is frequently constrained by drought conditions.

Objective

In this work, we have identified the untargeted drought stress-responsive metabolites in mature leaves of cluster beans under drought and control condition.

Methods

To analyse the untargeted metabolites, gas chromatography-mass spectrometry (GC-MS) technique was used. Supervised partial least-squares discriminate analysis and heat map were used to identify the most significant metabolites for drought tolerance.

Results

The mature leaves of drought-treated C. tetragonoloba cv. ‘HG-365’ which is a drought-tolerant cultivar, showed various types of amino acids, fatty acids, sugar alcohols and sugars as the major classes of metabolites recognized by GC-MS metabolome analysis. Metabolite profiling of guar leaves showed 23 altered metabolites. Eight metabolites (proline, valine, D-pinitol, palmitic acid, dodecanoic acid, threonine, glucose, and glycerol monostearate) with VIP score greater than one were considered as biomarkers and three metabolite biomarkers (D-pinitol, valine, and glycerol monostearate) were found for the first time in guar under drought stress. In this work, four amino acids (alanine, valine, serine and aspartic acid) were also studied, which played a significant role in drought-tolerant pathway in guar.

Conclusion

This study provides information on the first-ever GC-MS metabolic profiling of guar. This work gives in-depth details on guar’s untargeted drought-responsive metabolites and biomarkers, which can plausibly be used for further identification of biochemical pathways, enzymes, and the location of various genes under drought stress.

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来源期刊
Metabolomics
Metabolomics 医学-内分泌学与代谢
CiteScore
6.60
自引率
2.80%
发文量
84
审稿时长
2 months
期刊介绍: Metabolomics publishes current research regarding the development of technology platforms for metabolomics. This includes, but is not limited to: metabolomic applications within man, including pre-clinical and clinical pharmacometabolomics for precision medicine metabolic profiling and fingerprinting metabolite target analysis metabolomic applications within animals, plants and microbes transcriptomics and proteomics in systems biology Metabolomics is an indispensable platform for researchers using new post-genomics approaches, to discover networks and interactions between metabolites, pharmaceuticals, SNPs, proteins and more. Its articles go beyond the genome and metabolome, by including original clinical study material together with big data from new emerging technologies.
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