环状 RNA 作为男性严重败血症的潜在生物标记物

IF 1.7 4区 生物学 Q3 BIOLOGY Open Life Sciences Pub Date : 2024-07-24 DOI:10.1515/biol-2022-0900
Liang Jun, Zhonghua Wang, Shouhong Wang, Xiaolong Liao, Tiehe Qin, Weixin Guo
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引用次数: 0

摘要

环状 RNA(circRNA)在许多人类疾病中发挥着重要作用。然而,它们在重症脓毒症发病过程中的作用尚未明确,而重症脓毒症仍是重症监护室中导致死亡的主要原因之一。在这项研究中,我们探讨了 circRNAs 在严重败血症中的分子机制。我们使用人类 circRNA 阵列分析了从 9 例重症脓毒症患者或 9 例对照患者(男性,年龄 78 ± 7 岁)血样中提取的血浆中 5,680 个 circRNA 的表达水平。为了丰富寄主严重败血症相关 circRNA 的蛋白编码基因,我们进行了基因本体和通路分析。在确定的760个差异表达的circRNA中,404个上调,356个下调(折合变化[FC]≥2或≤-2,假发现比<0.05)。Circ-0008285(位于 CDYL 的外显子中)在严重脓毒症中显示出显著的上调,FC 为 13.7,Bonferroni 校正后的 P 为 0.05/5。硅学分析发现了与 Circ-0008285 相互作用的微RNA以及蛋白编码基因。我们系统地研究了严重败血症中 circRNAs 的不同表达模式。我们发现的 circRNAs 可作为脓毒症诊断和预后的潜在生物标志物。
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Circular RNAs as potential biomarkers for male severe sepsis
Circular RNAs (circRNAs) play important roles in many human diseases. However, their role in the development of severe sepsis, a condition that remains one of the main causes of death in intensive care units, has not yet been defined. In this study, we interrogated the molecular mechanisms of circRNAs in severe sepsis. We profiled the expression levels of 5,680 circRNAs in plasma extracted from blood samples of 9 severe sepsis cases or 9 controls (male, age 78 ± 7) using the Human circRNA Array. To enrich protein-coding genes hosting severe sepsis-related circRNAs, we conducted gene ontology and pathways analyses. Out of the identified 760 differentially expressed circRNAs, 404 were upregulated while 356 were downregulated (fold change [FC] ≥2 or ≤−2, and false discovery ratio <0.05). Circ-0008285 (located in exons of CDYL), showed significant upregulation in severe sepsis with an FC of 13.7, and Bonferroni-corrected P < 0.05/5. In silico analysis identified Circ-0008285 interacting microRNAs as well as protein-coding genes. We systematically investigated the differential expression pattern of circRNAs in severe sepsis. The circRNAs we identified might serve as potential biomarkers for diagnosis and prognosis of sepsis.
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来源期刊
CiteScore
2.50
自引率
4.50%
发文量
131
审稿时长
43 weeks
期刊介绍: Open Life Sciences (previously Central European Journal of Biology) is a fast growing peer-reviewed journal, devoted to scholarly research in all areas of life sciences, such as molecular biology, plant science, biotechnology, cell biology, biochemistry, biophysics, microbiology and virology, ecology, differentiation and development, genetics and many others. Open Life Sciences assures top quality of published data through critical peer review and editorial involvement throughout the whole publication process. Thanks to the Open Access model of publishing, it also offers unrestricted access to published articles for all users.
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