Jan Wilhelm Gärtner, Ali Shamooni, Thorsten Zirwes, Andreas Kronenburg
{"title":"OpenFOAM 的化学负载平衡模型","authors":"Jan Wilhelm Gärtner, Ali Shamooni, Thorsten Zirwes, Andreas Kronenburg","doi":"10.1016/j.cpc.2024.109322","DOIUrl":null,"url":null,"abstract":"<div><p>Efficient simulation tools are crucial for studying complex systems such as reacting flows where computational costs of computing chemical reaction rates can vastly exceed the costs for the integration of the convective and diffusive transport terms. Load imbalance in parallel computing poses a significant challenge for massively parallel reacting flow simulations. In response, a novel load balancing library has been developed to enhance OpenFOAM's solver performance in parallel environments. This library seamlessly integrates with OpenFOAM, offering ease of use and applicability to any OpenFOAM reacting solver incorporating finite-rate chemistry. In addition, it supports the standard and the dynamic adaptive chemistry model (TDAC) of OpenFOAM.</p><p>The newly developed load-balanced standard and TDAC models address significant load imbalances by exchanging information between processes via MPI calls and tracking ODE solution times on a cell level. The TDAC model introduces dual tables on each core and enables immediate addition of computed solutions, enhancing computational efficiency. Validation on various test cases, including simulations on the HLRS Hawk supercomputer with up to 8000 cores, confirms identical results compared to the original unbalanced models, with notable speed-up factors of up to 6 for the standard and 5 for the TDAC model. Despite non-linear scaling at lower cell count per processor, load-balanced models consistently outperform unbalanced counterparts, making them the preferred choice for reacting flow simulations in OpenFOAM.</p></div>","PeriodicalId":285,"journal":{"name":"Computer Physics Communications","volume":"305 ","pages":"Article 109322"},"PeriodicalIF":7.2000,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0010465524002455/pdfft?md5=3adc8b807a9e08b0e97c85b63e4b6320&pid=1-s2.0-S0010465524002455-main.pdf","citationCount":"0","resultStr":"{\"title\":\"A chemistry load balancing model for OpenFOAM\",\"authors\":\"Jan Wilhelm Gärtner, Ali Shamooni, Thorsten Zirwes, Andreas Kronenburg\",\"doi\":\"10.1016/j.cpc.2024.109322\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Efficient simulation tools are crucial for studying complex systems such as reacting flows where computational costs of computing chemical reaction rates can vastly exceed the costs for the integration of the convective and diffusive transport terms. Load imbalance in parallel computing poses a significant challenge for massively parallel reacting flow simulations. In response, a novel load balancing library has been developed to enhance OpenFOAM's solver performance in parallel environments. This library seamlessly integrates with OpenFOAM, offering ease of use and applicability to any OpenFOAM reacting solver incorporating finite-rate chemistry. In addition, it supports the standard and the dynamic adaptive chemistry model (TDAC) of OpenFOAM.</p><p>The newly developed load-balanced standard and TDAC models address significant load imbalances by exchanging information between processes via MPI calls and tracking ODE solution times on a cell level. The TDAC model introduces dual tables on each core and enables immediate addition of computed solutions, enhancing computational efficiency. Validation on various test cases, including simulations on the HLRS Hawk supercomputer with up to 8000 cores, confirms identical results compared to the original unbalanced models, with notable speed-up factors of up to 6 for the standard and 5 for the TDAC model. Despite non-linear scaling at lower cell count per processor, load-balanced models consistently outperform unbalanced counterparts, making them the preferred choice for reacting flow simulations in OpenFOAM.</p></div>\",\"PeriodicalId\":285,\"journal\":{\"name\":\"Computer Physics Communications\",\"volume\":\"305 \",\"pages\":\"Article 109322\"},\"PeriodicalIF\":7.2000,\"publicationDate\":\"2024-07-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0010465524002455/pdfft?md5=3adc8b807a9e08b0e97c85b63e4b6320&pid=1-s2.0-S0010465524002455-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer Physics Communications\",\"FirstCategoryId\":\"101\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0010465524002455\",\"RegionNum\":2,\"RegionCategory\":\"物理与天体物理\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer Physics Communications","FirstCategoryId":"101","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0010465524002455","RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Efficient simulation tools are crucial for studying complex systems such as reacting flows where computational costs of computing chemical reaction rates can vastly exceed the costs for the integration of the convective and diffusive transport terms. Load imbalance in parallel computing poses a significant challenge for massively parallel reacting flow simulations. In response, a novel load balancing library has been developed to enhance OpenFOAM's solver performance in parallel environments. This library seamlessly integrates with OpenFOAM, offering ease of use and applicability to any OpenFOAM reacting solver incorporating finite-rate chemistry. In addition, it supports the standard and the dynamic adaptive chemistry model (TDAC) of OpenFOAM.
The newly developed load-balanced standard and TDAC models address significant load imbalances by exchanging information between processes via MPI calls and tracking ODE solution times on a cell level. The TDAC model introduces dual tables on each core and enables immediate addition of computed solutions, enhancing computational efficiency. Validation on various test cases, including simulations on the HLRS Hawk supercomputer with up to 8000 cores, confirms identical results compared to the original unbalanced models, with notable speed-up factors of up to 6 for the standard and 5 for the TDAC model. Despite non-linear scaling at lower cell count per processor, load-balanced models consistently outperform unbalanced counterparts, making them the preferred choice for reacting flow simulations in OpenFOAM.
期刊介绍:
The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper.
Computer Programs in Physics (CPiP)
These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged.
Computational Physics Papers (CP)
These are research papers in, but are not limited to, the following themes across computational physics and related disciplines.
mathematical and numerical methods and algorithms;
computational models including those associated with the design, control and analysis of experiments; and
algebraic computation.
Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.