企鹅翼虫副伞的结构和蛋白质组分析:洞察翅果的进化和形成。

IF 2.8 2区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Journal of proteomics Pub Date : 2024-07-30 DOI:10.1016/j.jprot.2024.105267
Yi Chen , Hengda Chen , Changqing Han , Huilong Ou , Xin Zhan
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引用次数: 0

摘要

副壳是无柄双壳类动物独特的外部结构,对于定居和变态至关重要。然而,人们对企鹅蝶的粗壮蝶囊知之甚少。我们分别使用扫描电子显微镜和蛋白质组学方法探索了蝶形花的结构和蛋白质。结果表明,企鹅的颖壳具有致密且高度排列整齐的纤维内核,外层角质层含有嵌入蛋白质基质中的蛋白质颗粒。蛋白质组分析表明,副螯中有31种蛋白质,其中15种差异表达蛋白质主要富集在EGF/EGF-like和层粘连蛋白EGF-like结构域。足部蛋白则富集在 EF-hand、免疫球蛋白和纤连蛋白结构域。所有这些结构域都可以参与细胞外基质(ECM)中的蛋白质-蛋白质和/或蛋白质-金属相互作用,再加上在粘液中检测到的七种 ECM 蛋白质,支持了粘液来源于 ECM 的假设。我们还发现,体外无细胞结构的副壳和贝壳在形成过程中具有共性。这些结果有助于进一步了解贝壳的进化和贝壳相关蛋白质的特征。意义:本手稿研究了翼手目企鹅副壳的结构和起源,因为副壳是企鹅繁殖的重要保护层,甚至可以抵御影响企鹅生存的环境压力。然而,有关翼企鹅粘液蛋白质组成的研究却很少。因此,通过扫描电子显微镜和蛋白质组学研究,我们发现企鹅副莎草具有致密和高度排列的纤维内核,外层角质层的蛋白质基质中嵌入了蛋白质颗粒。蛋白质组学分析表明,副壳中有31种蛋白质,其中15种蛋白质主要富集在EGF/EGF-like和TSP-1结构域。与粘液形成密切相关的足蛋白质富集在 EF 手、免疫球蛋白和纤维粘连蛋白结构域。这些结构域能够参与细胞外基质(ECM)中的蛋白质-蛋白质和/或蛋白质-金属相互作用,再加上在粘液中检测到的七种 ECM 蛋白质,支持了粘液来源于 ECM 的假设。我们还发现,在体外无细胞结构中,副壳和贝壳在形成过程中具有共同之处。这些结果有助于进一步了解贝壳的演化过程和贝壳相关蛋白的特征。
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The structure and proteomic analysis of byssus in Pteria penguin: Insights into byssus evolution and formation

Byssus is a unique external structure in sessile bivalves and is critical for settlement and metamorphosis. However, little is known about the stout byssus in Pteria penguin. We explored the byssus structure and proteins using scanning electron microscopy and proteomics, respectively. The results revealed that P. penguin byssus has a dense and highly aligned fiber inner core, and the outer cuticle contains protein granules embedded in the protein matrix. Proteomic analysis revealed 31 proteins in the byssus, among which 15 differentially expressed proteins were mainly enriched in the EGF/EGF-like and laminin EGF-like domains. Foot proteins were enriched in the EF-hand, immunoglobulin, and fibronectin domains. All these domains can participate in protein-protein and/or protein-metal interactions in the extracellular matrix (ECM), which, together with the seven types of ECM proteins detected in the byssus, supports the hypothesis that the byssus is derived from the ECM. We also found that in vitro acellular structures of the byssus and the shell shared commonalities in their formation processes. These results are useful for further understanding byssus evolution and the characterization of byssus-related proteins.

Significance

This manuscript investigates the structure and the origin of Pteria penguin byssus, given that byssus is vital to provide critical protection for reproduction and even against environmental stresses that affect survival. However, there is rare research on byssus protein composition. Hence, though scanning electron microscopy and proteomic analysis, we discovered that P. penguin byssus possesses the dense and highly aligned fiber inner core, and the outer cuticle has protein granules embedded in the protein matrix. Proteomic analysis showed that there were 31 proteins in the byssus, among which 15 proteins were mainly enriched in the EGF/EGF-like and laminin EGF-like domains. Foot proteins closely related to byssus formation were enriched in EF hand, immunoglobulin, and fibronectin domains. These domains are able to participate in protein-protein and/or protein-metal interactions in the extracellular matrix (ECM), which together with the seven types of ECM proteins detected in byssus support the hypothesis that byssus derive from the ECM. We also found in vitro acellular structures the byssus and the shell share commonalities in their formation processes. These results were useful for further understanding the byssus evolution and the characterization of the byssus-related proteins.

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来源期刊
Journal of proteomics
Journal of proteomics 生物-生化研究方法
CiteScore
7.10
自引率
3.00%
发文量
227
审稿时长
73 days
期刊介绍: Journal of Proteomics is aimed at protein scientists and analytical chemists in the field of proteomics, biomarker discovery, protein analytics, plant proteomics, microbial and animal proteomics, human studies, tissue imaging by mass spectrometry, non-conventional and non-model organism proteomics, and protein bioinformatics. The journal welcomes papers in new and upcoming areas such as metabolomics, genomics, systems biology, toxicogenomics, pharmacoproteomics. Journal of Proteomics unifies both fundamental scientists and clinicians, and includes translational research. Suggestions for reviews, webinars and thematic issues are welcome.
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