第一个完整的琉球蝇属线粒体基因组以及对琉球蝇科(鞘翅目:琉球蝇科)系统发育的见解。

Pub Date : 2024-08-02 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2385610
Lijie Jin, Qiang Ding, Lijie Zhang, Ming Bai
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引用次数: 0

摘要

Homoderus mellyi 属于鞘翅目琉球科。本文首次报道了褐飞虱完整的有丝分裂基因组。该基因组全长 16,807 bp,包含典型的 37 个基因,其中有 22 个转移 RNA 基因、13 个蛋白质编码基因和 2 个核糖体 RNA 基因。基因顺序在整个品系中保持一致。有丝分裂基因组的平均碱基组成为:A 占 36.6%,C 占 20.8%,G 占 11.6%,T 占 31.1%,GC 占 32.3%。基因组的组织结构、核苷酸组成和密码子用法与其他甲虫相似。系统进化分析表明,琉球科为单系,各亚科分别为单系。H. mellyi的系统发育位置与其他研究一致。
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The first complete mitochondrial genome of the genus Homoderus and insights into phylogeny of Lucanidae (Coleoptera: Lucanidae).

Homoderus mellyi belongs to the Lucanidae family of Coleoptera. The first complete mitogenome of Homoderus is reported in this paper. The genome is 16,807 bp in length and contains the typical 37 genes with 22 transfer RNA genes, 13 protein coding genes, and 2 ribosomal RNA genes. The gene order is conserved across the lineage. The average base composition of the mitogenome is 36.6% for A, 20.8% for C, 11.6% for G, and 31.1% for T. The percentage of GC is 32.3%. The genome organization, nucleotide composition, and codon usage are similar to other beetles. Phylogenetic analysis shows that Lucanidae is monophyletic, and all subfamilies are monophyletic, respectively. The phylogenetic position of H. mellyi is consistent with other research.

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