Agniva Datta, Sönke Beier, Veronika Pfeifer, Robert Großmann, Carsten Beta
{"title":"凝胶中细菌的间歇运行运动呈现幂律分布的停留时间","authors":"Agniva Datta, Sönke Beier, Veronika Pfeifer, Robert Großmann, Carsten Beta","doi":"arxiv-2408.02317","DOIUrl":null,"url":null,"abstract":"While bacterial swimming has been well characterized in uniform liquid\nenvironments, only little is known about how bacteria propagate through complex\nenvironments, such as gel-like matrices or porous media that are typically\nencountered in tissue or soil. Here, we study swimming motility of the soil\nbacterium Pseudomonas putida (P. putida) in polysaccharide matrices formed by\ndifferent concentrations of agar. P. putida cells display intermittent\nrun-motility in the gel, where run times are exponentially distributed and\nintermittently occurring dwell times follow a waiting-time distribution with a\npower-law decay. An analysis of the turn angle distribution suggests that both,\nflagella mediated turning as well as mechanical trapping in the agar matrix\nplay a role in the overall swimming pattern. Based on the experimentally\nobserved motility pattern and measured waiting-time distributions, we propose a\nminimal active particle model which correctly describes the observed time\ndependence of the mean square displacement of the bacterial swimmers.","PeriodicalId":501040,"journal":{"name":"arXiv - PHYS - Biological Physics","volume":"22 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Intermittent Run Motility of Bacteria in Gels Exhibits Power-Law Distributed Dwell Times\",\"authors\":\"Agniva Datta, Sönke Beier, Veronika Pfeifer, Robert Großmann, Carsten Beta\",\"doi\":\"arxiv-2408.02317\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"While bacterial swimming has been well characterized in uniform liquid\\nenvironments, only little is known about how bacteria propagate through complex\\nenvironments, such as gel-like matrices or porous media that are typically\\nencountered in tissue or soil. Here, we study swimming motility of the soil\\nbacterium Pseudomonas putida (P. putida) in polysaccharide matrices formed by\\ndifferent concentrations of agar. P. putida cells display intermittent\\nrun-motility in the gel, where run times are exponentially distributed and\\nintermittently occurring dwell times follow a waiting-time distribution with a\\npower-law decay. An analysis of the turn angle distribution suggests that both,\\nflagella mediated turning as well as mechanical trapping in the agar matrix\\nplay a role in the overall swimming pattern. Based on the experimentally\\nobserved motility pattern and measured waiting-time distributions, we propose a\\nminimal active particle model which correctly describes the observed time\\ndependence of the mean square displacement of the bacterial swimmers.\",\"PeriodicalId\":501040,\"journal\":{\"name\":\"arXiv - PHYS - Biological Physics\",\"volume\":\"22 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-08-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - PHYS - Biological Physics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2408.02317\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - PHYS - Biological Physics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2408.02317","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Intermittent Run Motility of Bacteria in Gels Exhibits Power-Law Distributed Dwell Times
While bacterial swimming has been well characterized in uniform liquid
environments, only little is known about how bacteria propagate through complex
environments, such as gel-like matrices or porous media that are typically
encountered in tissue or soil. Here, we study swimming motility of the soil
bacterium Pseudomonas putida (P. putida) in polysaccharide matrices formed by
different concentrations of agar. P. putida cells display intermittent
run-motility in the gel, where run times are exponentially distributed and
intermittently occurring dwell times follow a waiting-time distribution with a
power-law decay. An analysis of the turn angle distribution suggests that both,
flagella mediated turning as well as mechanical trapping in the agar matrix
play a role in the overall swimming pattern. Based on the experimentally
observed motility pattern and measured waiting-time distributions, we propose a
minimal active particle model which correctly describes the observed time
dependence of the mean square displacement of the bacterial swimmers.