{"title":"人类抗原 R 在视网膜病理环境中介导的转化生长因子 Beta 1 表达调节作用","authors":"Sruthi Priya Mohan , Hemavathy Nagarajan , Umashankar Vetrivel , Sharada Ramasubramanyan","doi":"10.1016/j.bbrep.2024.101807","DOIUrl":null,"url":null,"abstract":"<div><p>The fate and stability of messenger RNA (mRNA), from transcription to degradation is regulated by a dynamic shuttle of epigenetic modifications and RNA binding proteins in maintaining healthy cellular homeostasis and disease development. While Transforming Growth Factor Beta 1 (TGFβ1) has been implicated as a key regulator for diabetic retinopathy, a microvascular complication of diabetes, the RNA binding proteins post-transcriptionally regulating its expression remain unreported in the ocular context. Further, dysfunction of TGFβ1 signalling is also strongly associated with angiogenesis, inflammatory responses and tissue fibrosis in many eye conditions leading to vision loss. In this study, computational and molecular simulations were initially carried out to identify Human Antigen R (HuR) binding sites in <em>TGFβ1</em> mRNA and predict the structural stability of these RNA-protein interactions. These findings were further validated through <em>in vitro</em> experiments utilizing Cobalt Chloride (CoCl<sub>2</sub>) as a hypoxia mimetic agent in human retinal microvascular endothelial cells (HRMVEC). <em>In silico</em> analysis revealed that HuR preferentially binds to the 5′-UTR of <em>TGFβ1</em> and displayed more stable interaction than the 3′UTR. Consistent with <em>in silico</em> analysis, RNA immunoprecipitation demonstrated a robust association between HuR and <em>TGFβ1</em> mRNA specifically under hypoxic conditions. Further, silencing of HuR significantly reduced TGFβ1 protein expression upon CoCl<sub>2</sub> treatment. Thus, for the first time in ocular pathological milieu, direct evidence of HuR- <em>TGFβ1</em> mRNA interaction under conditions of hypoxia has been reported in this study providing valuable insights into RNA binding proteins as therapeutic targets for ocular diseases associated with TGFβ1 dysregulation.</p></div>","PeriodicalId":8771,"journal":{"name":"Biochemistry and Biophysics Reports","volume":"39 ","pages":"Article 101807"},"PeriodicalIF":2.3000,"publicationDate":"2024-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2405580824001717/pdfft?md5=f1aefce3f5e74c7bcc1b678846a7e9b5&pid=1-s2.0-S2405580824001717-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Human Antigen R -mediated modulation of Transforming Growth Factor Beta 1 expression in retinal pathological milieu\",\"authors\":\"Sruthi Priya Mohan , Hemavathy Nagarajan , Umashankar Vetrivel , Sharada Ramasubramanyan\",\"doi\":\"10.1016/j.bbrep.2024.101807\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The fate and stability of messenger RNA (mRNA), from transcription to degradation is regulated by a dynamic shuttle of epigenetic modifications and RNA binding proteins in maintaining healthy cellular homeostasis and disease development. While Transforming Growth Factor Beta 1 (TGFβ1) has been implicated as a key regulator for diabetic retinopathy, a microvascular complication of diabetes, the RNA binding proteins post-transcriptionally regulating its expression remain unreported in the ocular context. Further, dysfunction of TGFβ1 signalling is also strongly associated with angiogenesis, inflammatory responses and tissue fibrosis in many eye conditions leading to vision loss. In this study, computational and molecular simulations were initially carried out to identify Human Antigen R (HuR) binding sites in <em>TGFβ1</em> mRNA and predict the structural stability of these RNA-protein interactions. These findings were further validated through <em>in vitro</em> experiments utilizing Cobalt Chloride (CoCl<sub>2</sub>) as a hypoxia mimetic agent in human retinal microvascular endothelial cells (HRMVEC). <em>In silico</em> analysis revealed that HuR preferentially binds to the 5′-UTR of <em>TGFβ1</em> and displayed more stable interaction than the 3′UTR. Consistent with <em>in silico</em> analysis, RNA immunoprecipitation demonstrated a robust association between HuR and <em>TGFβ1</em> mRNA specifically under hypoxic conditions. Further, silencing of HuR significantly reduced TGFβ1 protein expression upon CoCl<sub>2</sub> treatment. Thus, for the first time in ocular pathological milieu, direct evidence of HuR- <em>TGFβ1</em> mRNA interaction under conditions of hypoxia has been reported in this study providing valuable insights into RNA binding proteins as therapeutic targets for ocular diseases associated with TGFβ1 dysregulation.</p></div>\",\"PeriodicalId\":8771,\"journal\":{\"name\":\"Biochemistry and Biophysics Reports\",\"volume\":\"39 \",\"pages\":\"Article 101807\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2024-08-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2405580824001717/pdfft?md5=f1aefce3f5e74c7bcc1b678846a7e9b5&pid=1-s2.0-S2405580824001717-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biochemistry and Biophysics Reports\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2405580824001717\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemistry and Biophysics Reports","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405580824001717","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Human Antigen R -mediated modulation of Transforming Growth Factor Beta 1 expression in retinal pathological milieu
The fate and stability of messenger RNA (mRNA), from transcription to degradation is regulated by a dynamic shuttle of epigenetic modifications and RNA binding proteins in maintaining healthy cellular homeostasis and disease development. While Transforming Growth Factor Beta 1 (TGFβ1) has been implicated as a key regulator for diabetic retinopathy, a microvascular complication of diabetes, the RNA binding proteins post-transcriptionally regulating its expression remain unreported in the ocular context. Further, dysfunction of TGFβ1 signalling is also strongly associated with angiogenesis, inflammatory responses and tissue fibrosis in many eye conditions leading to vision loss. In this study, computational and molecular simulations were initially carried out to identify Human Antigen R (HuR) binding sites in TGFβ1 mRNA and predict the structural stability of these RNA-protein interactions. These findings were further validated through in vitro experiments utilizing Cobalt Chloride (CoCl2) as a hypoxia mimetic agent in human retinal microvascular endothelial cells (HRMVEC). In silico analysis revealed that HuR preferentially binds to the 5′-UTR of TGFβ1 and displayed more stable interaction than the 3′UTR. Consistent with in silico analysis, RNA immunoprecipitation demonstrated a robust association between HuR and TGFβ1 mRNA specifically under hypoxic conditions. Further, silencing of HuR significantly reduced TGFβ1 protein expression upon CoCl2 treatment. Thus, for the first time in ocular pathological milieu, direct evidence of HuR- TGFβ1 mRNA interaction under conditions of hypoxia has been reported in this study providing valuable insights into RNA binding proteins as therapeutic targets for ocular diseases associated with TGFβ1 dysregulation.
期刊介绍:
Open access, online only, peer-reviewed international journal in the Life Sciences, established in 2014 Biochemistry and Biophysics Reports (BB Reports) publishes original research in all aspects of Biochemistry, Biophysics and related areas like Molecular and Cell Biology. BB Reports welcomes solid though more preliminary, descriptive and small scale results if they have the potential to stimulate and/or contribute to future research, leading to new insights or hypothesis. Primary criteria for acceptance is that the work is original, scientifically and technically sound and provides valuable knowledge to life sciences research. We strongly believe all results deserve to be published and documented for the advancement of science. BB Reports specifically appreciates receiving reports on: Negative results, Replication studies, Reanalysis of previous datasets.