HOX家族调控因子介导的修饰模式和免疫特征对子宫内膜癌肿瘤相关细胞类型的影响

IF 6.3 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular biomedicine Pub Date : 2024-08-14 DOI:10.1186/s43556-024-00196-w
JiaoLin Yang, JinPeng Li, SuFen Li, YuTong Yang, HuanCheng Su, HongRui Guo, Jing Lei, YaLin Wang, KaiTing Wen, Xia Li, SanYuan Zhang, Zhe Wang
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摘要

子宫内膜癌(UCEC)是女性三大恶性肿瘤之一。HOX 基因调控着肿瘤的发展。然而,HOX 在 UCEC 中多种细胞类型的表达机制以及肿瘤微环境(TME)细胞浸润的发展和进展中的潜在作用仍然未知。本研究利用癌症基因组图谱(The Cancer Genome Atlas,TCGA)数据库和国际癌症基因组联盟(International Cancer Genome Consortium,ICGC)数据库,分析了529例UCEC患者的转录组数据,基于39个HOX基因,结合临床信息,我们发现HOX基因在UCEC的发生、发展以及TME多样性和复杂性的形成中起着关键作用。在此,我们开发了一种新的评分系统来量化 UCEC 中的单个 HOX 模式。我们的研究发现,低HOX评分组患者有大量抗肿瘤免疫细胞浸润,肿瘤分化良好,预后较好。相反,高HOX评分与免疫检查点受阻有关,而免疫检查点受阻会增强对免疫疗法的反应。实时定量 PCR(RT-qPCR)和免疫组化(IHC)显示,肿瘤患者的 HOX 基因表达较高。我们通过单细胞 RNA 测序(scRNA-seq)发现,HOX 基因在上皮细胞中的显著上调可激活与肿瘤侵袭和转移相关的信号通路,如核苷酸代谢过程等。最后,根据 HOX 评分与癌症相关成纤维细胞(CAFs)之间的正相关关系建立的风险预后模型,可以通过 scRNA-seq 和转录组数据集预测个体患者的预后。总之,HOX基因可作为潜在的生物标志物,用于UCEC的诊断和预测,并开发更有效的治疗策略。
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Effects of HOX family regulator-mediated modification patterns and immunity characteristics on tumor-associated cell type in endometrial cancer.

Endometrial cancer (UCEC) is one of three major malignant tumors in women. The HOX gene regulates tumor development. However, the potential roles of HOX in the expression mechanism of multiple cell types and in the development and progression of tumor microenvironment (TME) cell infiltration in UCEC remain unknown. In this study, we utilized both the The Cancer Genome Atlas (TCGA) database and International Cancer Genome Consortium (ICGC) database to analyze transcriptome data of 529 patients with UCEC based on 39 HOX genes, combing clinical information, we discovered HOX gene were a pivotal factor in the development and progression of UCEC and in the formation of TME diversity and complexity. Here, a new scoring system was developed to quantify individual HOX patterns in UCEC. Our study found that patients in the low HOX score group had abundant anti-tumor immune cell infiltration, good tumor differentiation, and better prognoses. In contrast, a high HOX score was associated with blockade of immune checkpoints, which enhances the response to immunotherapy. The Real-Time quantitative PCR (RT-qPCR) and Immunohistochemistry (IHC) exhibited a higher expression of the HOX gene in the tumor patients. We revealed that the significant upregulation of the HOX gene in the epithelial cells can activate signaling pathway associated with tumour invasion and metastasis through single-cell RNA sequencing (scRNA-seq), such as nucleotide metabolic proce and so on. Finally, a risk prognostic model established by the positive relationship between HOX scores and cancer-associated fibroblasts (CAFs) can predict the prognosis of individual patients by scRNA-seq and transcriptome data sets. In sum, HOX gene may serve as a potential biomarker for the diagnosis and prediction of UCEC and to develop more effective therapeutic strategies.

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