缺血性心肌病和扩张型心肌病的 T 细胞相关血清标记物的差异。

IF 2.1 3区 医学 Q3 RESPIRATORY SYSTEM Journal of thoracic disease Pub Date : 2024-07-30 Epub Date: 2024-07-26 DOI:10.21037/jtd-24-901
Yuli Huang, Lin Xuan, Qiong Xu, Jun Wang, Jie Liu
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引用次数: 0

摘要

背景:缺血性心肌病(ICM)和扩张型心肌病(DCM)的临床表现相似,但发病机制不同。我们旨在确定可用于区分 ICM 和 DCM 的 T 细胞相关血清标记物:方法:我们利用 GSE116250 中的转录组测序数据确定了差异表达基因(DEGs),然后在基因本体(GO)和京都基因与基因组百科全书(KEGG)数据库中对 DEGs 进行了富集分析。蛋白质-蛋白质相互作用(PPI)网络用于分析T细胞相关基因之间的关系,并确定枢纽基因。使用酶联免疫吸附试验(ELISA)试剂盒检测血清中的T细胞相关蛋白,并使用接收者操作特征曲线(ROC)评估这些血清标记物的诊断效果:使用 limma 软件包和 Venn 图,我们发现与 ICM 组相比,非衰竭供体(NFD)组和 DCM 组共享许多相同的 DEGs 和 DEGs 富集功能,这些 DEGs 参与 T 细胞活化和分化等功能。随后,免疫细胞得分显示,NFD 和 DCM 之间没有差异,但他们在 CD8 T 细胞、CD4 T 细胞记忆静息和活化、T 细胞滤泡辅助细胞和 M1 巨噬细胞方面与 ICM 患者有显著差异。分析 T 细胞相关 DEGs 后发现,与 NFD 组和 DCM 组相比,ICM 组有 4 个编码分泌蛋白的 DEGs 高表达,它们是趋化因子(C-C 矩阵)配体 21(CCL21)、白细胞介素(IL)-1β、淋巴细胞活化基因 3(LAG3)和血管细胞粘附分子-1(VCAM-1)。重要的是,ICM 患者血清中的 CCL21、IL-1β、LAG3 和 VCAM-1 水平均明显高于 DCM 患者。ROC 曲线显示,血清 CCL21、IL-1β、LAG3 和 VCAM-1 的曲线下面积(AUC)值分别为 0.775、0.868、0.934 和 0.903:我们发现了四种与 T 细胞相关的血清标记物:CCL21、IL-1β、LAG3 和 VCAM-1,它们是区分 ICM 和 DCM 的潜在诊断血清标记物。
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Differences in T cell-associated serum markers between ischemic cardiomyopathy and dilated cardiomyopathy.

Background: Ischemic cardiomyopathy (ICM) and dilated cardiomyopathy (DCM) have similar clinical manifestations but differ in pathogenesis. We aimed to identify T cell-associated serum markers that can be used to distinguish between ICM and DCM.

Methods: We identified differentially expressed genes (DEGs) with transcriptome sequencing data in GSE116250, and then conducted enrichment analysis of DEGs in the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases. Protein-protein interaction (PPI) networks were used to analyze the relationship between T cells-related genes and identify hub genes. Enzyme-linked immunosorbent assay (ELISA) kits were used to detect T cell-associated proteins in serum, and receiver operating characteristic (ROC) curves were used to evaluate the diagnostic efficacy of these serum markers.

Results: Using the limma package and Venn plots, we found that the non-failing donors (NFD) and DCM groups shared many of the same DEGs and DEGs-enriched functions compared to the ICM group, which were involved in T cell activation and differentiation, among other functions. Subsequently, the immune cell score showed no difference between NFD and DCM, but they were significantly different from ICM patients in CD8 T cells CD4 T cells memory resting and activated, T cells follicular helper, and M1 macrophage. After analyzing T cell-associated DEGs, it was found that 4 DEGs encoding secreted proteins were highly expressed in the ICM group compared with the NFD and DCM groups, namely chemokine (C-C motif) ligand 21 (CCL21), interleukin (IL)-1β, lymphocyte-activation gene 3 (LAG3), and vascular cell adhesion molecule-1 (VCAM-1). Importantly, the serum levels of CCL21, IL-1β, LAG3, and VCAM-1 in ICM patients were all significantly higher than those in DCM patients. The ROC curves showed that the area under the curve (AUC) values of serum CCL21, IL-1β, LAG3, and VCAM-1 were 0.775, 0.868, 0.934, and 0.903, respectively.

Conclusions: We have identified four T cell-associated serum markers, CCL21, IL-1β, LAG3, and VCAM-1, as potential diagnostic serum markers that differentiate ICM from DCM.

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来源期刊
Journal of thoracic disease
Journal of thoracic disease RESPIRATORY SYSTEM-
CiteScore
4.60
自引率
4.00%
发文量
254
期刊介绍: The Journal of Thoracic Disease (JTD, J Thorac Dis, pISSN: 2072-1439; eISSN: 2077-6624) was founded in Dec 2009, and indexed in PubMed in Dec 2011 and Science Citation Index SCI in Feb 2013. It is published quarterly (Dec 2009- Dec 2011), bimonthly (Jan 2012 - Dec 2013), monthly (Jan. 2014-) and openly distributed worldwide. JTD received its impact factor of 2.365 for the year 2016. JTD publishes manuscripts that describe new findings and provide current, practical information on the diagnosis and treatment of conditions related to thoracic disease. All the submission and reviewing are conducted electronically so that rapid review is assured.
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