Peziza nivalis 及其近缘种--分布广泛的春季真菌。

IF 2.6 2区 生物学 Q2 MYCOLOGY Mycologia Pub Date : 2024-08-19 DOI:10.1080/00275514.2024.2370198
Donald H Pfister, Katherine F LoBuglio, Michael Bradshaw, Renée Lebeuf, Andrus Voitk
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引用次数: 0

摘要

严格意义上的 Peziza 属的几个成员出现在融雪边缘。这些裸子植物在北半球被广泛报道,在澳大利亚和新西兰也有发现。我们利用来自北美和澳大利亚的 16 个标本进行了形态学研究和 DNA 测序。在序列分析中,我们使用了 ITS1 和 ITS2(内部转录间隔)、28S、RPB2(RNA 聚合酶 II 基因)以及两个新基因,即 GAPDH(甘油醛-3-磷酸脱氢酶)和 HSP90(热休克蛋白 90)。虽然并非所有样本的所有区域都能找到,但我们已经确认了以下物种:Peziza heimii、P. nivalis 和 P. nivis。系统发育分析仅使用 ITS;联合使用 ITS1-5.8S-ITS2、28S 和 RPB2;ITS 以及 28S、RPB2、GAPDH 和 HSP90。即使使用了这组扩增基因,尽管它们广泛分布于北美、欧洲、澳大利亚和新西兰,我们仍未能明确区分出该类群中的物种。为了评估这些结果,我们采用了成对同源指数(PHI)分析。结果表明,在尼瓦尔河豚的样本中存在重组的证据,这进一步支持了尼瓦尔河豚作为单系世界性物种的观点。作为本研究的一部分,我们还研究了 P. echinospora 中 ITS 拷贝的变异情况,该物种的基因组已经获得。
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Peziza nivalis and relatives-spring fungi of wide distribution.

Several members of the genus Peziza sensu stricto occur at the edge of melting snow. These nivicolous species have been widely reported in the Northern Hemisphere and are also known from Australia and New Zealand. We have used 16 specimens from North America and Australia to study morphology and to perform DNA sequencing. In sequence analyses, we have used ITS1 and ITS2 (internal transcribed spacers), 28S, RPB2 (RNA polymerase II gene), and two genes new to these studies, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) and HSP90 (heat shock protein 90). Although not all regions are available for all samples, we have recognized the following species: Peziza heimii, P. nivalis, and P. nivis. Phylogenetic analyses were done using ITS alone; combined ITS1-5.8S-ITS2, 28S, and RPB2; ITS, and 28S, RPB2, GAPDH, and HSP90. Even with this augmented set of genes and despite their widespread occurrence in North America, Europe, Australia, and New Zealand, we have not definitively distinguished species within this group. To assess these results, pairwise homoplasy index (PHI) analysis was employed. This showed evidence of recombination among the samples of P. nivalis and further supports the view of P. nivalis as a monophyletic cosmopolitan species. As part of this study, we also examined the variation in ITS copies in P. echinospora, for which a genome is available.

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来源期刊
Mycologia
Mycologia 生物-真菌学
CiteScore
6.20
自引率
3.60%
发文量
56
审稿时长
4-8 weeks
期刊介绍: International in coverage, Mycologia presents recent advances in mycology, emphasizing all aspects of the biology of Fungi and fungus-like organisms, including Lichens, Oomycetes and Slime Molds. The Journal emphasizes subjects including applied biology, biochemistry, cell biology, development, ecology, evolution, genetics, genomics, molecular biology, morphology, new techniques, animal or plant pathology, phylogenetics, physiology, aspects of secondary metabolism, systematics, and ultrastructure. In addition to research articles, reviews and short notes, Mycologia also includes invited papers based on presentations from the Annual Conference of the Mycological Society of America, such as Karling Lectures or Presidential Addresses.
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