常见多因素眼疾的代谢组学研究:老年性黄斑变性、青光眼、糖尿病视网膜病变和近视的生物标志物发现综述。

IF 3.9 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Frontiers in Molecular Biosciences Pub Date : 2024-08-13 eCollection Date: 2024-01-01 DOI:10.3389/fmolb.2024.1403844
Gizachew Tilahun Belete, Lei Zhou, King-Kit Li, Pui-Kin So, Chi-Wai Do, Thomas Chuen Lam
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引用次数: 0

摘要

简介多因素眼部疾病是一个重大的公共卫生问题,对生活质量有很大影响。由于使用的是功能性和低通量生物测试,人们对这些眼部疾病的病理生理机制并不完全了解。通过识别与眼部疾病相关的生物标志物,代谢组学可以实现早期识别、病程跟踪和个性化治疗:方法:在 PubMed、Scopus、PsycINFO 和 Web of Science 等电子数据库中搜索与老年黄斑变性(AMD)、青光眼、近视和糖尿病视网膜病变(DR)相关的研究。搜索于 2023 年 8 月进行。病例和对照的数量、研究的设计、使用的分析方法以及代谢组学分析的结果均被提取出来。我们使用 QUADOMICS 工具对纳入研究的质量进行了评估,并检查了代谢通路的独特代谢特征。我们使用 MetaboAnalyst 5.0 对差异代谢物进行通路分析:本综述中的代谢组学研究包括 36 项人类研究(5 项老年性黄斑变性、10 项青光眼、13 项糖尿病视网膜病变和 8 项近视)。在老年性黄斑变性中,联网最多的代谢物包括甘氨酸和单磷酸腺苷,而在青光眼中则发现了蛋氨酸、赖氨酸、丙氨酸、乙醛酸和半胱氨酸。此外,在近视眼中,甘油、谷氨酸、丙酮酸、甘氨酸、半胱氨酸和氧谷氨酸构成了重要的代谢物,而在糖尿病视网膜病变中,甘油、谷氨酸、赖氨酸、柠檬酸、丙氨酸和羟色胺则是高度网络化的代谢物。精氨酸和脯氨酸代谢、蛋氨酸代谢、甘氨酸和丝氨酸代谢、尿素循环代谢以及嘌呤代谢是与老年性视网膜病变、青光眼、DR和近视显著相关的常见顶级代谢途径:本综述再现了AMD、青光眼、DR和近视中潜在的代谢生物标志物、网络和途径,为阐明疾病机制和治疗靶点提供了新线索。先进代谢组学技术的出现大大提高了代谢分析的能力,为这些多因素眼病的代谢和潜在发病机制提供了新的视角。预计代谢组学的进步将促进对疾病病因学的深入理解,有助于确定新的治疗靶点,并在眼科研究中开创个性化医学时代。
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Metabolomics studies in common multifactorial eye disorders: a review of biomarker discovery for age-related macular degeneration, glaucoma, diabetic retinopathy and myopia.

Introduction: Multifactorial Eye disorders are a significant public health concern and have a huge impact on quality of life. The pathophysiological mechanisms underlying these eye disorders were not completely understood since functional and low-throughput biological tests were used. By identifying biomarkers linked to eye disorders, metabolomics enables early identification, tracking of the course of the disease, and personalized treatment.

Methods: The electronic databases of PubMed, Scopus, PsycINFO, and Web of Science were searched for research related to Age-Related macular degeneration (AMD), glaucoma, myopia, and diabetic retinopathy (DR). The search was conducted in August 2023. The number of cases and controls, the study's design, the analytical methods used, and the results of the metabolomics analysis were all extracted. Using the QUADOMICS tool, the quality of the studies included was evaluated, and metabolic pathways were examined for distinct metabolic profiles. We used MetaboAnalyst 5.0 to undertake pathway analysis of differential metabolites.

Results: Metabolomics studies included in this review consisted of 36 human studies (5 Age-related macular degeneration, 10 Glaucoma, 13 Diabetic retinopathy, and 8 Myopia). The most networked metabolites in AMD include glycine and adenosine monophosphate, while methionine, lysine, alanine, glyoxylic acid, and cysteine were identified in glaucoma. Furthermore, in myopia, glycerol, glutamic acid, pyruvic acid, glycine, cysteine, and oxoglutaric acid constituted significant metabolites, while glycerol, glutamic acid, lysine, citric acid, alanine, and serotonin are highly networked metabolites in cases of diabetic retinopathy. The common top metabolic pathways significantly enriched and associated with AMD, glaucoma, DR, and myopia were arginine and proline metabolism, methionine metabolism, glycine and serine metabolism, urea cycle metabolism, and purine metabolism.

Conclusion: This review recapitulates potential metabolic biomarkers, networks and pathways in AMD, glaucoma, DR, and myopia, providing new clues to elucidate disease mechanisms and therapeutic targets. The emergence of advanced metabolomics techniques has significantly enhanced the capability of metabolic profiling and provides novel perspectives on the metabolism and underlying pathogenesis of these multifactorial eye conditions. The advancement of metabolomics is anticipated to foster a deeper comprehension of disease etiology, facilitate the identification of novel therapeutic targets, and usher in an era of personalized medicine in eye research.

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来源期刊
Frontiers in Molecular Biosciences
Frontiers in Molecular Biosciences Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
7.20
自引率
4.00%
发文量
1361
审稿时长
14 weeks
期刊介绍: Much of contemporary investigation in the life sciences is devoted to the molecular-scale understanding of the relationships between genes and the environment — in particular, dynamic alterations in the levels, modifications, and interactions of cellular effectors, including proteins. Frontiers in Molecular Biosciences offers an international publication platform for basic as well as applied research; we encourage contributions spanning both established and emerging areas of biology. To this end, the journal draws from empirical disciplines such as structural biology, enzymology, biochemistry, and biophysics, capitalizing as well on the technological advancements that have enabled metabolomics and proteomics measurements in massively parallel throughput, and the development of robust and innovative computational biology strategies. We also recognize influences from medicine and technology, welcoming studies in molecular genetics, molecular diagnostics and therapeutics, and nanotechnology. Our ultimate objective is the comprehensive illustration of the molecular mechanisms regulating proteins, nucleic acids, carbohydrates, lipids, and small metabolites in organisms across all branches of life. In addition to interesting new findings, techniques, and applications, Frontiers in Molecular Biosciences will consider new testable hypotheses to inspire different perspectives and stimulate scientific dialogue. The integration of in silico, in vitro, and in vivo approaches will benefit endeavors across all domains of the life sciences.
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