Yuzhi Liu, Evelyne Bischof, Zhiqin Chen, Jiahuan Zhou, Bei Zhang, Ding Zhang, Yong Gao, Ming Quan
{"title":"大规模中国结直肠癌患者的基因组图谱分析:ERBB2 的扩增和体细胞突变。","authors":"Yuzhi Liu, Evelyne Bischof, Zhiqin Chen, Jiahuan Zhou, Bei Zhang, Ding Zhang, Yong Gao, Ming Quan","doi":"10.32604/or.2024.047309","DOIUrl":null,"url":null,"abstract":"<p><strong>Objectives: </strong>Human epidermal growth factor receptor 2 (HER2)-targeted therapies have demonstrated potential benefits for metastatic colorectal cancer (mCRC) patients with HER2 amplification, but are not satisfactory in cases of HER2 mutant CRCs.</p><p><strong>Methods: </strong>Consequently, further elucidation of amplifications and somatic mutations in erythroblastic oncogene B-2 (ERBB2) is imperative. Comprehensive genomic profiling was conducted on 2454 Chinese CRC cases to evaluate genomic alterations in 733 cancer-related genes, tumor mutational burden, microsatellite instability, and programmed death ligand 1 (PD-L1) expression.</p><p><strong>Results: </strong>Among 2454 CRC patients, 85 cases (3.46%) exhibited ERBB2 amplification, and 55 cases (2.24%) carried ERBB2 mutation. p.R678Q (28%), p.V8421 (24%), and p.S310F/Y (12%) were the most prevalent of the 16 detected mutation sites. In comparison to the ERBB2 altered (alt) group, KRAS/BRAF mutations were more prevalent in ERBB2 wild-type (wt) samples (ERBB2wt <i>vs</i>. ERBB2alt, KRAS: 50.9% <i>vs</i>. 25.6%, <i>p</i> < 0.05; BRAF: 8.5% <i>vs</i>. 2.3%, <i>p</i> < 0.05). 32.7% (18/55) of CRCs with ERBB2 mutation exhibited microsatellite instability high (MSI-H), while no cases with HER2 amplification displayed MSI-H. Mutant genes varied between ERBB2 copy number variation (CNV) and ERBB2 single nucleotide variant (SNV); TP53 alterations tended to co-occur with ERBB2 amplification (92.3%) as opposed to ERBB2 mutation (58.3%). KRAS and PIK3CA alterations were more prevalent in ERBB2 SNV cases (KRAS/PIK3CA: 45.8%/31.2%) compared to ERBB2 amplification cases (KRAS/PIK3CA: 14.1%/7.7%).</p><p><strong>Conclusion: </strong>Our study delineates the landscape of HER2 alterations in a large-scale cohort of CRC patients from China. These findings enhance our understanding of the molecular features of Chinese CRC patients and offer valuable implications for further investigation.</p>","PeriodicalId":19537,"journal":{"name":"Oncology Research","volume":"32 9","pages":"1429-1438"},"PeriodicalIF":2.0000,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11361911/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genomic profiling of colorectal cancer in large-scale Chinese patients: amplification and somatic mutations in ERBB2.\",\"authors\":\"Yuzhi Liu, Evelyne Bischof, Zhiqin Chen, Jiahuan Zhou, Bei Zhang, Ding Zhang, Yong Gao, Ming Quan\",\"doi\":\"10.32604/or.2024.047309\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objectives: </strong>Human epidermal growth factor receptor 2 (HER2)-targeted therapies have demonstrated potential benefits for metastatic colorectal cancer (mCRC) patients with HER2 amplification, but are not satisfactory in cases of HER2 mutant CRCs.</p><p><strong>Methods: </strong>Consequently, further elucidation of amplifications and somatic mutations in erythroblastic oncogene B-2 (ERBB2) is imperative. Comprehensive genomic profiling was conducted on 2454 Chinese CRC cases to evaluate genomic alterations in 733 cancer-related genes, tumor mutational burden, microsatellite instability, and programmed death ligand 1 (PD-L1) expression.</p><p><strong>Results: </strong>Among 2454 CRC patients, 85 cases (3.46%) exhibited ERBB2 amplification, and 55 cases (2.24%) carried ERBB2 mutation. p.R678Q (28%), p.V8421 (24%), and p.S310F/Y (12%) were the most prevalent of the 16 detected mutation sites. In comparison to the ERBB2 altered (alt) group, KRAS/BRAF mutations were more prevalent in ERBB2 wild-type (wt) samples (ERBB2wt <i>vs</i>. ERBB2alt, KRAS: 50.9% <i>vs</i>. 25.6%, <i>p</i> < 0.05; BRAF: 8.5% <i>vs</i>. 2.3%, <i>p</i> < 0.05). 32.7% (18/55) of CRCs with ERBB2 mutation exhibited microsatellite instability high (MSI-H), while no cases with HER2 amplification displayed MSI-H. 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引用次数: 0
摘要
目的:人类表皮生长因子受体 2 (HER2)靶向疗法对 HER2 扩增的转移性结直肠癌 (mCRC) 患者有潜在益处,但对 HER2 突变的 CRC 病例效果并不理想:因此,进一步阐明红细胞癌基因B-2(ERBB2)的扩增和体细胞突变势在必行。我们对2454例中国CRC病例进行了全面的基因组图谱分析,以评估733个癌症相关基因的基因组改变、肿瘤突变负荷、微卫星不稳定性和程序性死亡配体1(PD-L1)的表达:在检测到的16个突变位点中,p.R678Q(28%)、p.V8421(24%)和p.S310F/Y(12%)最为常见。与ERBB2改变(alt)组相比,KRAS/BRAF突变在ERBB2野生型(wt)样本中更为普遍(ERBB2wt vs. ERBB2alt, KRAS:50.9% vs. 25.6%,p < 0.05;BRAF:8.5% vs. 2.3%,p < 0.05)。32.7%(18/55)的ERBB2突变的CRC表现出微卫星不稳定性高(MSI-H),而HER2扩增的病例没有表现出MSI-H。突变基因在ERBB2拷贝数变异(CNV)和ERBB2单核苷酸变异(SNV)之间存在差异;TP53改变倾向于与ERBB2扩增(92.3%)同时发生,而非ERBB2突变(58.3%)。与ERBB2扩增病例(KRAS/PIK3CA:14.1%/7.7%)相比,KRAS和PIK3CA改变在ERBB2 SNV病例中更为普遍(KRAS/PIK3CA:45.8%/31.2%):我们的研究描述了中国大规模 CRC 患者队列中 HER2 基因改变的情况。这些发现加深了我们对中国 CRC 患者分子特征的了解,并为进一步研究提供了有价值的启示。
Genomic profiling of colorectal cancer in large-scale Chinese patients: amplification and somatic mutations in ERBB2.
Objectives: Human epidermal growth factor receptor 2 (HER2)-targeted therapies have demonstrated potential benefits for metastatic colorectal cancer (mCRC) patients with HER2 amplification, but are not satisfactory in cases of HER2 mutant CRCs.
Methods: Consequently, further elucidation of amplifications and somatic mutations in erythroblastic oncogene B-2 (ERBB2) is imperative. Comprehensive genomic profiling was conducted on 2454 Chinese CRC cases to evaluate genomic alterations in 733 cancer-related genes, tumor mutational burden, microsatellite instability, and programmed death ligand 1 (PD-L1) expression.
Results: Among 2454 CRC patients, 85 cases (3.46%) exhibited ERBB2 amplification, and 55 cases (2.24%) carried ERBB2 mutation. p.R678Q (28%), p.V8421 (24%), and p.S310F/Y (12%) were the most prevalent of the 16 detected mutation sites. In comparison to the ERBB2 altered (alt) group, KRAS/BRAF mutations were more prevalent in ERBB2 wild-type (wt) samples (ERBB2wt vs. ERBB2alt, KRAS: 50.9% vs. 25.6%, p < 0.05; BRAF: 8.5% vs. 2.3%, p < 0.05). 32.7% (18/55) of CRCs with ERBB2 mutation exhibited microsatellite instability high (MSI-H), while no cases with HER2 amplification displayed MSI-H. Mutant genes varied between ERBB2 copy number variation (CNV) and ERBB2 single nucleotide variant (SNV); TP53 alterations tended to co-occur with ERBB2 amplification (92.3%) as opposed to ERBB2 mutation (58.3%). KRAS and PIK3CA alterations were more prevalent in ERBB2 SNV cases (KRAS/PIK3CA: 45.8%/31.2%) compared to ERBB2 amplification cases (KRAS/PIK3CA: 14.1%/7.7%).
Conclusion: Our study delineates the landscape of HER2 alterations in a large-scale cohort of CRC patients from China. These findings enhance our understanding of the molecular features of Chinese CRC patients and offer valuable implications for further investigation.
期刊介绍:
Oncology Research Featuring Preclinical and Clincal Cancer Therapeutics publishes research of the highest quality that contributes to an understanding of cancer in areas of molecular biology, cell biology, biochemistry, biophysics, genetics, biology, endocrinology, and immunology, as well as studies on the mechanism of action of carcinogens and therapeutic agents, reports dealing with cancer prevention and epidemiology, and clinical trials delineating effective new therapeutic regimens.