基于 16S rRNA 测序的五种水母物种相关微生物多样性及潜在病原体和有益菌筛选。

Liangzhi Li, Yina Zhu, Feng Wu, Yuxin Shen, Yi Wang, Juan Höfer, Marina Pozzolini, Mingke Wang, Liang Xiao, Xiaojie Dai
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引用次数: 0

摘要

水母、微生物和海洋环境共同构成了一个复杂的生态系统。本研究旨在分析与五种水母相关的微生物群落,探索它们的组成、多样性和关系。利用 16S rRNA 基因测序和 QIIME 分析评估了各物种之间的微生物多样性。发现细菌组成存在显著差异,每个物种都有不同的优势类群:Aurelia coerulea 中的支原体科(99.21%)、Cassiopea andromeda 中的鞘单胞菌科(22.81%)、Alphaproteobacteria_unclassified(科级)(64.09%)、Phacellophora camtschatica 中的 Parcubacteria_unclassified(科级)(93.11%)、Rhopilema esculentum 中的衣藻科(35.05%)和 Alphaproteobacteria_unclassified(科级)(38.73%)。C. andromeda 的多样性最高,而 A. coerulea 的多样性最低。优势菌属之间的相关性各不相同,其中 Parcubacteria_unclassified(属级)与 Chlamydiaceae_unclassified(属级)之间呈正相关。基因富集在代谢途径和 ABC 转运体中。在门一级,最丰富的潜在病原体是变形菌、担子菌、衣原体和埃普西隆杆菌。不同的微生物组成可能受到物种及其栖息地的影响。水母与微生物之间以及微生物与微生物之间的相互作用表现为相互依存或相互拮抗。大多数微生物基因功能集中在代谢途径上,因此有必要进一步研究致病菌与这些途径之间的关系。
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Microbial Diversity and Screening for Potential Pathogens and Beneficial Bacteria of Five Jellyfish Species-Associated Microorganisms Based on 16S rRNA Sequencing.

Jellyfish, microorganisms, and the marine environment collectively shape a complex ecosystem. This study aimed to analyze the microbial communities associated with five jellyfish species, exploring their composition, diversity, and relationships. Microbial diversity among the species was assessed using 16S rRNA gene sequencing and QIIME analysis. Significant differences in bacterial composition were found, with distinct dominant taxa in each species: Mycoplasmataceae (99.21%) in Aurelia coerulea, Sphingomonadaceae (22.81%) in Cassiopea andromeda, Alphaproteobacteria_unclassified (family level) (64.09%) in Chrysaora quinquecirrha, Parcubacteria_unclassified (family level) (93.11%) in Phacellophora camtschatica, and Chlamydiaceae (35.05%) and Alphaproteobacteria_unclassified (family level) (38.73%) in Rhopilema esculentum. C. andromeda showed the highest diversity, while A. coerulea exhibited the lowest. Correlations among dominant genera varied, including a positive correlation between Parcubacteria_unclassified (genus level) and Chlamydiaceae_unclassified (genus level). Genes were enriched in metabolic pathways and ABC transporters. The most abundant potential pathogens at the phylum level were Proteobacteria, Tenericutes, Chlamydiae, and Epsilonbacteraeota. The differing microbial compositions are likely influenced by species and their habitats. Interactions between jellyfish and microorganisms, as well as among microorganisms, showed interdependency or antagonism. Most microbial gene functions focused on metabolic pathways, warranting further study on the relationship between pathogenic bacteria and these pathways.

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