全球球蛋白网络和采用地中海贫血基因组变异数据库要求。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC ACS Applied Electronic Materials Pub Date : 2024-09-04 DOI:10.1093/database/baae080
Hashim Halim-Fikri, Ninie Nadia Zulkipli, Hafiza Alauddin, Celeste Bento, Carsten W Lederer, Petros Kountouris, Marina Kleanthous, Yetti Hernaningsih, Meow-Keong Thong, Muhammad Hamdi Mahmood, Norafiza Mohd Yasin, Ezalia Esa, Jacques Elion, Domenico Coviello, Raja-Zahratul-Azma Raja-Sabudin, Ghada El-Kamah, John Burn, Narazah Mohd Yusoff, Raj Ramesar, Bin Alwi Zilfalil
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引用次数: 0

摘要

地中海贫血症是中低收入国家(LMICs)最常见的单基因疾病之一。据估计,全球有 2.7 亿血红蛋白病(血红蛋白异常和/或地中海贫血)携带者,因此需要全球性的方法和解决方案来提供有效和最佳的治疗。低收入和中等收入国家受地中海贫血症的影响尤为严重,由于基因组学意识和诊断资源的差异,某些低收入和中等收入国家落后于高收入国家。这促使全球球蛋白网络(GGN)于 2015 年在巴黎教科文组织成立,作为人类变异组计划(HVP)内的一项全项目工作。GGN 的主要目的是加强地中海贫血的临床服务、研究和基因组诊断能力,重点关注低收入国家的需求,旨在促进所有受影响国家在共享数据库中收集数据,从而改善数据共享和地中海贫血管理。在本文中,我们根据 HVP 数据库指南提出了建立地中海贫血基因组数据库的最低要求。我们建议使用 HVP 推荐的现有平台,即莱顿开放变异数据库 (LOVD) (https://www.lovd.nl/)。采用我们建议的标准将有助于改进或补充现有数据库,从而为地中海贫血患者提供更高质量的服务。数据库网址:https://www.lovd.nl/。
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Global Globin Network and adopting genomic variant database requirements for thalassemia.

Thalassemia is one of the most prevalent monogenic disorders in low- and middle-income countries (LMICs). There are an estimated 270 million carriers of hemoglobinopathies (abnormal hemoglobins and/or thalassemia) worldwide, necessitating global methods and solutions for effective and optimal therapy. LMICs are disproportionately impacted by thalassemia, and due to disparities in genomics awareness and diagnostic resources, certain LMICs lag behind high-income countries (HICs). This spurred the establishment of the Global Globin Network (GGN) in 2015 at UNESCO, Paris, as a project-wide endeavor within the Human Variome Project (HVP). Primarily aimed at enhancing thalassemia clinical services, research, and genomic diagnostic capabilities with a focus on LMIC needs, GGN aims to foster data collection in a shared database by all affected nations, thus improving data sharing and thalassemia management. In this paper, we propose a minimum requirement for establishing a genomic database in thalassemia based on the HVP database guidelines. We suggest using an existing platform recommended by HVP, the Leiden Open Variation Database (LOVD) (https://www.lovd.nl/). Adoption of our proposed criteria will assist in improving or supplementing the existing databases, allowing for better-quality services for individuals with thalassemia. Database URL: https://www.lovd.nl/.

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