细胞质 hPGK1 的磷酸化影响蛋白质的稳定性和配体结合:对其在癌症中的亚细胞靶向的影响。

Juan Luis Pacheco-García, Mario Cano-Muñoz, Dmitry S Loginov, Pavla Vankova, Petr Man, Angel L Pey
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摘要

人类磷酸甘油酸激酶1(hPGK1)是一种关键的糖酵解酶,它能调节细胞内ADP和ATP浓度之间的平衡。hPGK1 在 S203 和 S256 处的磷酸化与酶从细胞质分别导入线粒体和细胞核有关。这些亚细胞位置的变化推动了肿瘤的发生,并可能与蛋白质稳定性的特定位点变化有关。在这项工作中,我们通过氢氘交换(HDX)和分子动力学(MD)模拟研究了特定位点磷酸化对热稳定性、动力学稳定性和蛋白质结构动力学的影响。我们还利用这些方法研究了 3-磷酸甘油酸和 Mg-ADP 的结合。我们发现拟磷突变 S256D 使 hPGK1 的动力学稳定性降低了 50 倍,而 S203D 突变则没有影响。配体结合的热量测定研究表明,S256D 突变体对 Mg-ADP 的亲和力大大降低,而 Mg-ADP 与 WT 和 S203D 的结合可以使用蛋白质动力学稳定性和结合热力学模型进行精确研究。HDX 和 MD 模拟证实了 S256D 突变所导致的不稳定性(对稳定性有一定的长程影响),以及由于其结合位点的强烈不稳定性(尤其是在 apo 状态下)而导致的对 Mg-ADP 亲和力的降低。我们的研究提供的证据表明,蛋白质稳定性的改变可能会增强 hPGK1 在癌症中向细胞核的转位。而其线粒体输入的结构和能量基础仍是未知数。
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Phosphorylation of cytosolic hPGK1 affects protein stability and ligand binding: implications for its subcellular targeting in cancer.

Human phosphoglycerate kinase 1(hPGK1) is a key glycolytic enzyme that regulates the balance between ADP and ATP concentrations inside the cell. Phosphorylation of hPGK1 at S203 and S256 has been associated with enzyme import from the cytosol to the mitochondria and the nucleus respectively. These changes in subcellular locations drive tumorigenesis and are likely associated with site-specific changes in protein stability. In this work, we investigate the effects of site-specific phosphorylation on thermal and kinetic stability and protein structural dynamics by hydrogen-deuterium exchange (HDX) and molecular dynamics (MD) simulations. We also investigate the binding of 3-phosphoglycerate and Mg-ADP using these approaches. We show that the phosphomimetic mutation S256D reduces hPGK1 kinetic stability by 50-fold, with no effect of the mutation S203D. Calorimetric studies of ligand binding show a large decrease in affinity for Mg-ADP in the S256D variant, whereas Mg-ADP binding to the WT and S203D can be accurately investigated using protein kinetic stability and binding thermodynamic models. HDX and MD simulations confirmed the destabilization caused by the mutation S256D (with some long-range effects on stability) and its reduced affinity for Mg-ADP due to the strong destabilization of its binding site (particularly in the apo-state). Our research provides evidence suggesting that modifications in protein stability could potentially enhance the translocation of hPGK1 to the nucleus in cancer. While the structural and energetic basis of its mitochondrial import remain unknown.

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