发现带有吡唑/恶二唑分子的香豆素支架的新分子杂交衍生物:分子对接、POM 分析、默克药代动力学和体外抗菌评估,并确定有效的抗肿瘤药理位点。

IF 4.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Bioorganic Chemistry Pub Date : 2024-08-30 DOI:10.1016/j.bioorg.2024.107761
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引用次数: 0

摘要

这种有机合成方法包括创造新型香豆素类杂交化合物,其系列(1-4)具有吡唑环,(5-8)具有噁二唑分子。以环丙沙星和氟康唑为参考标准,采用盘扩散和肉汤微稀释法测试了目标化合物对金黄色葡萄球菌、大肠杆菌、铜绿假单胞菌和白色念珠菌等病原微生物的体外抗菌效力。密度泛函理论(DFT)研究用于研究原子结构和反应性,包括绝对电负性(χ)、亲电性(ω)、电子受体(ω+)、供体能力(ω-)、电子亲和力(EA)、能隙(ΔE)、全局硬度(η)、全局软度(S)和电离势(IP)以及 FMOs、NBOs、MEP 和 Mulliken 电荷分析。POM 测试发现了三个具有抗菌、抗病毒和抗癌活性的综合药效位点。分子对接研究还用于确定金黄色葡萄球菌核苷二磷酸激酶受体对合成药物的亲和力和作用模式。通过对热力学和疗效特性(包括利宾斯基 "五法则"、维伯法则和 ADME 特性)进行硅学分析,预测了合成复合物的无毒性、非致癌性和无口服风险性。
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Discovery of new molecular hybrid derivatives with coumarin scaffold bearing pyrazole/oxadiazole moieties: Molecular docking, POM analyses, in silico pharmacokinetics and in vitro antimicrobial evaluation with identification of potent antitumor pharmacophore sites

This synthetic organic methodology involves the creation of novel coumarin-based hybrids of series (14) with pyrazole ring and (58) with oxadiazole moiety. The targeted compounds were tested for In vitro Antimicrobial efficacy against Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, and Candida albicans pathogenic microbes using disc diffusion and broth microdilution with ciprofloxacin and fluconazole as reference standards. Density functional theory (DFT) studies were used to study atomic structure and reactivity, including absolute electronegativity (χ), electrophilicity (ω), electron acceptor (ω+), donor capabilities (ω–), electron affinity (EA), energy gap (ΔE), global hardness (η), global softness (S), and ionisation potential (IP) and FMOs, NBOs, MEP, and Mulliken Charge analysis. The POM tests found three integrated pharmacophore sites with antibacterial, antiviral, and anticancer activities. Molecular docking studies are also used to determine the S. aureus nucleoside diphosphate kinase receptor’s affinity and mode of action for the synthesized drugs. In silico analysis of thermodynamic and therapeutic effectiveness properties, including Lipinski’s ’rule of five’, Veber’s rule, and ADME properties, predicted toxicity-free, non-carcinogenic, and risk-free oral administration of the synthesized complexes.

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来源期刊
Bioorganic Chemistry
Bioorganic Chemistry 生物-生化与分子生物学
CiteScore
9.70
自引率
3.90%
发文量
679
审稿时长
31 days
期刊介绍: Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry. For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature. The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.
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