揭示 NDUFAF4 在结肠癌中的作用:多组学分析的启示

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-09-05 DOI:10.1016/j.jprot.2024.105309
Taimoor Riaz, Muhammad Zubair
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引用次数: 0

摘要

结肠癌是一个重大的公共卫生问题,需要深入了解其分子基础[16],以提高敏感性和治愈率。这项研究将 NDUFAF4 基因作为关注目标,因为它与线粒体功能和蛋白质 "肝脏肿瘤发生的相对性 "有关,但目前尚不清楚这是否归因于它被纳入了复合体 I(CI)通路。基因本体分析则表明,NDUFAF4 在与线粒体功能和能量代谢相关的几个关键生物阶段中起着关键作用。此外,生存分析表明,NDUFAF4 的表达与患者的寿命密切相关,这表明该因子在结肠癌的预后中可能也很重要。TCGA 数据证明了 NDUFAF4 在结肠癌中的升高,因此报告的分析结果是可信的。综上所述,我们可以理解 NDUFAF4 作为分子靶点在治疗每位结肠癌患者中的作用和重要性。这些发现有助于了解结肠癌的发病机制,并为开发更有效的诊断和治疗方法提供建议。意义:这项研究将 NDUFAF4 基因作为一个受关注的靶点,因为它与线粒体功能和蛋白质 "肝脏肿瘤发生的相对性 "有关,目前仍不清楚这是否归因于它被纳入了复合体 I(CI)通路。我们采用基因本体分析、蛋白-蛋白相互作用网络建模、生存分析、KEGG通路分析等综合方法,并利用TCGA数据进行验证,确定了NDUFAF4在结肠癌中的活性。基因本体分析则表明,NDUFAF4 在与线粒体功能和能量代谢相关的几个关键生物阶段中起着关键作用。PPI网络的构建说明了NDUFAF4这一功能性关联蛋白在细胞调控网络中的相互作用者。此外,生存分析表明,NDUFAF4的表达与患者的生存有相当大的关系,表明它可能是结肠癌的预后因素。KEGG 通路分析表明,NDUFAF4 在产热和线粒体生物生成过程中发挥作用,由于这些过程与细胞代谢和癌症发病有关,因此应将其作为靶点。TCGA 信息的使用证实了 NDUFAF4 在结肠癌中的上调,因此报告的分析结果是可靠的。总之,我们的研究为结肠癌病例中潜在分子靶点 NDUFAF4 的作用和意义提供了必要的信息。这些发现增进了我们对结肠癌发病机制的了解,并为设计新型诊断和治疗方法以改善患者预后提供了新的机遇。
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Unravelling the role of NDUFAF4 in Colon Cancer: Insights from multi-omics analysis

Colon cancer is a significant public health issue, and a deeper understanding of the molecular fundamentals [16] ehind is required to improve sensitivity and curability. This research explored the gene NDUFAF4 as a target of concern due to its link to a mitochondrial function and protein “Relatively of liver tumorigenesis”, which remains unclear is attributable to its inclusion into the complex I (CI) pathway. The gene ontology analysis, in turn, showed that NDUFAF4 is a key player in several critical biological phases linked to mitochondrial function and energy metabolism. Furthermore, survival analysis displayed that there was a strong correlation between NDUFAF4 expression and the patients' longevity suggesting that this factor may be important in colon cancer prognosis as well. The TCGA data proved that NDUFAF4 is elevated in colon cancer making the results of the analysis reported credible. All of the above justified the understanding of the role and importance of NDUFAF4 in treating each colon cancer patient as a molecular target. The findings help in understanding the colon cancer pathogenesis and suggest ways for developing more efficient diagnosis and treatment of the disease.

Significance

This research explored the gene NDUFAF4 as a target of concern due to its link to a mitochondrial function and protein “Relatively of liver tumorigenesis”, which remains unclear is attributable to its inclusion into the complex I (CI) pathway. Using a comprehensive approach to Gene Ontology analysis, Protein-Protein Interaction network modelling, survival analysis, KEGG pathway analysis, and validation using TCGA data, we identified the activities of NDUFAF4 in colon cancer. The Gene Ontology analysis, in turn, showed that NDUFAF4 is a key player in several critical biological phases linked to mitochondrial function and energy metabolism. The construction of the PPI network illustrates the interactors of NDUFAF4, the functional association protein within the cellular regulatory networks. In addition, survival analysis indicated that there was a considerable relationship between the expression of NDUFAF4 and patient survival, indicating its potential role as a prognostic factor in colon cancer. KEGG pathway analysis suggested that NDUFAF4 plays a role in thermogenesis and mitochondrial biogenesis, biological processes that should be targeted due to their implication in cellular metabolism and cancer onset. The use of TCGA information confirmed the upregulation of NDUFAF4 in colon cancer, thus making the findings of the analysis reported dependable. Overall, our study provided necessary information on the role and significance of NDUFAF4, a potential molecular target in colon cancer cases. These present findings enhance our knowledge of the pathogenesis of colon cancer and open new opportunities for designing novel diagnostic and therapeutic approaches to improve patient outcomes.

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ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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