韩国外胚层发育不良患者的遗传特征和诊断策略。

IF 3.4 2区 医学 Q2 GENETICS & HEREDITY Orphanet Journal of Rare Diseases Pub Date : 2024-09-07 DOI:10.1186/s13023-024-03331-6
Man Jin Kim, Jee-Soo Lee, Seung Won Chae, Sung Im Cho, Jangsup Moon, Jung Min Ko, Jong-Hee Chae, Moon-Woo Seong
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引用次数: 0

摘要

背景:外胚层发育不良(ED)是一种罕见的遗传性疾病:外胚层发育不良(ED)是一种罕见的遗传性疾病,会影响来自外胚层胚芽层的结构:在这项研究中,我们分析了 27 名韩国 ED 患者的基因图谱。我们对 23 名患者进行了全外显子组测序(WES),并对其余 4 名患者进行了靶向面板测序。在队列中,74.1%的患者(20/27)ED检测呈阳性。在这些阳性病例中,80%(16/20)发现了 EDA 和 EDAR 突变。值得注意的是,23.1%(3/13)的 EDA 阳性病例出现了拷贝数变异。在接受 WES 检查的 23 例患者中,我们对 8 个知名基因进行了虚拟面板分析,结果 56.5%(13/23)的病例被确诊。此外,对大约 5000 个 OMIM 基因的进一步分析又发现了 4 个病例,使总体阳性率提高了约 17%。这些发现凸显了 WES 在提高 ED 诊断率方面的潜力。值得注意的是,94.1% 表现出完整三联 ED 症状(毛发/皮肤/牙科)的患者显示出可检测到的 EDA/EDAR 突变。相比之下,没有这三种症状的7名患者中没有一人出现EDA/EDAR突变:结论:在对 ED 进行分子诊断时,对于有典型症状的病例,最好选择对 EDA/EDAR 基因突变进行靶向测序,而对于没有这些症状的病例,WES 被认为是一种有效的策略。
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Genetic profiling and diagnostic strategies for patients with ectodermal dysplasias in Korea.

Background: Ectodermal dysplasia (ED) is a rare genetic disorder that affects structures derived from the ectodermal germ layer.

Results: In this study, we analyzed the genetic profiles of 27 Korean patients with ED. Whole exome sequencing (WES) was performed on 23 patients, and targeted panel sequencing was conducted on the remaining 4 patients. Among the patients in the cohort, 74.1% (20/27) tested positive for ED. Of these positive cases, EDA and EDAR mutations were found in 80% (16/20). Notably, 23.1% (3/13) of EDA-positive cases exhibited copy number variations. Among the 23 patients who underwent WES, we conducted a virtual panel analysis of eight well-known genes, resulting in diagnoses for 56.5% (13/23) of the cases. Additionally, further analysis of approximately 5,000 OMIM genes identified four more cases, increasing the overall positivity rate by approximately 17%. These findings underscore the potential of WES for improving the diagnostic yield of ED. Remarkably, 94.1% of the patients manifesting the complete triad of ED symptoms (hair/skin/dental) displayed detectable EDA/EDAR mutations. In contrast, none of the 7 patients without these three symptoms exhibited EDA/EDAR mutations.

Conclusions: When conducting molecular diagnostics for ED, opting for targeted sequencing of EDA/EDAR mutations is advisable for cases with classical symptoms, while WES is deemed an effective strategy for cases in which these symptoms are absent.

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来源期刊
Orphanet Journal of Rare Diseases
Orphanet Journal of Rare Diseases 医学-医学:研究与实验
CiteScore
6.30
自引率
8.10%
发文量
418
审稿时长
4-8 weeks
期刊介绍: Orphanet Journal of Rare Diseases is an open access, peer-reviewed journal that encompasses all aspects of rare diseases and orphan drugs. The journal publishes high-quality reviews on specific rare diseases. In addition, the journal may consider articles on clinical trial outcome reports, either positive or negative, and articles on public health issues in the field of rare diseases and orphan drugs. The journal does not accept case reports.
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