通过物理信息神经网络预测土壤微生物群生长的数值方法

IF 2.2 2区 数学 Q1 MATHEMATICS, APPLIED Applied Numerical Mathematics Pub Date : 2024-09-03 DOI:10.1016/j.apnum.2024.08.025
Salvatore Cuomo, Mariapia De Rosa, Francesco Piccialli, Laura Pompameo, Vincenzo Vocca
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引用次数: 0

摘要

近年来,利用科学机器学习(SciML)技术解决偏微分方程(PDE)求解难题的兴趣日益浓厚。本研究的重点是利用一种新颖的数值方法--物理信息神经网络(PINN)预测土壤中微生物种群的生长情况。这种方法对于克服与土壤细菌的普遍不可培养性相关的固有挑战至关重要。考虑到温度、太阳辐射、空气湿度、土壤水分状况和外部天气条件等环境因素,PINN 可用于模拟细菌和真菌种群的生长。本文分析了与数学模型相关的一些稳定性问题。此外,通过利用实地数据和应用描述微生物生长生物机制的方程,训练了一个 PINN,以预测微生物群随着时间的推移而发展。结果表明,利用 PINN 研究微生物的生长和进化是一种很有前途的工具,可用于改善农业、优化栽培过程和促进有效的资源管理。
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A numerical approach for soil microbiota growth prediction through physics-informed neural network

In recent years, there has been a growing interest in leveraging Scientific Machine Learning (SciML) techniques to address challenges in solving Partial Differential Equations (PDEs). This study focuses on forecasting the growth of microbial populations in soil using a novel numerical methodology, the Physics-Informed Neural Network (PINN). This approach is crucial in overcoming the inherent challenges associated with the general unculturability of soil bacteria. PINNs can be used to model the growth of bacterial and fungal populations, considering environmental factors like temperature, solar radiation, air humidity, soil hydration status, and external weather conditions. In this paper, some stability issues related to the mathematical model have been analyzed. Moreover, by utilizing field data and applying equations that describe the biological mechanisms of microbial growth, a PINN was trained to predict the development of the microbiota over time. The results demonstrate that the use of PINNs for studying microbial growth and evolution is a promising tool for enhancing agriculture, optimizing cultivation processes, and facilitating efficient resource management.

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来源期刊
Applied Numerical Mathematics
Applied Numerical Mathematics 数学-应用数学
CiteScore
5.60
自引率
7.10%
发文量
225
审稿时长
7.2 months
期刊介绍: The purpose of the journal is to provide a forum for the publication of high quality research and tutorial papers in computational mathematics. In addition to the traditional issues and problems in numerical analysis, the journal also publishes papers describing relevant applications in such fields as physics, fluid dynamics, engineering and other branches of applied science with a computational mathematics component. The journal strives to be flexible in the type of papers it publishes and their format. Equally desirable are: (i) Full papers, which should be complete and relatively self-contained original contributions with an introduction that can be understood by the broad computational mathematics community. Both rigorous and heuristic styles are acceptable. Of particular interest are papers about new areas of research, in which other than strictly mathematical arguments may be important in establishing a basis for further developments. (ii) Tutorial review papers, covering some of the important issues in Numerical Mathematics, Scientific Computing and their Applications. The journal will occasionally publish contributions which are larger than the usual format for regular papers. (iii) Short notes, which present specific new results and techniques in a brief communication.
期刊最新文献
Editorial Board Editorial Board Orthogonal designs for computer experiments constructed from sequences with zero autocorrelation Multilinear algebra methods for higher-dimensional graphs Extrapolated splitting methods for multilinear PageRank computations
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