软体动物甲壳素合成酶的进化及其对海洋酸化的响应

IF 3.6 1区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Phylogenetics and Evolution Pub Date : 2024-09-08 DOI:10.1016/j.ympev.2024.108192
Maoxiao Peng , João C.R. Cardoso , Deborah M. Power
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引用次数: 0

摘要

几丁质合成酶(CHS)存在于大多数真核生物中,具有复杂的进化历史。对CHS的研究主要集中在软体动物贝壳的生物矿化方面,由于海洋酸化的后果,这一领域备受关注。对软体动物基因组水平上的CHS、同工酶的进化、其组织分布以及对环境挑战的响应等方面的探索在很大程度上是未知的。通过利用软体动物物种的大量分子资源,我们发现双壳类动物拥有迄今为止真核生物中最多的 CHS 基因(12-22 个)。在软体动物类一级构建的进化树表明,在最近的共同祖先中可能存在四种 CHS II 型异构体(A-D),II-A 型(II-A-1 型/II-A-2 型)和 II-C 型(II-C-1 型/II-C-2 型)经历了进一步分化。在类水平上出现了非特异性的 CHS 同工型缺失,在某些 II 型(B-D 组)同工型中,与外壳形成有关的肌球蛋白头部结构域没有被保留下来,CHS 同工型的组织表达出现了高度的物种特异性。这些观察结果有力地支持了 CHS 功能多样化的观点,壳的生物矿化是几种重要功能之一。转录组数据分析揭示了CHS同工形式在贝壳形成中的物种特异性潜力,以及物种对海洋酸化(OA)的特异性响应。OA的影响并不依赖于CHS同工酶,尽管在Mytilus和M.总之,在 CHS 的进化过程中,双壳类动物的基因家族不断扩大,产生了大量具有不同结构的同工酶,而且其组织分布无处不在,这表明几丁质参与了多种生物功能。这些发现有助于深入了解 CHS 在软体动物中的进化,并为研究其功能和对环境变化的响应奠定了基础。
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Evolution of chitin-synthase in molluscs and their response to ocean acidification

Chitin-synthase (CHS) is found in most eukaryotes and has a complex evolutionary history. Research into CHS has mainly been in the context of biomineralization of mollusc shells an area of high interest due to the consequences of ocean acidification. Exploration of CHS at the genomic level in molluscs, the evolution of isoforms, their tissue distribution, and response to environmental challenges are largely unknown. Exploiting the extensive molecular resources for mollusc species it is revealed that bivalves possess the largest number of CHS genes (12–22) reported to date in eukaryotes. The evolutionary tree constructed at the class level of molluscs indicates four CHS Type II isoforms (A-D) probably existed in the most recent common ancestor, and Type II-A (Type II-A-1/Type II-A-2) and Type II-C (Type II-C-1/Type II-C-2) underwent further differentiation. Non-specific loss of CHS isoforms occurred at the class level, and in some Type II (B-D groups) isoforms the myosin head domain, which is associated with shell formation, was not preserved and highly species-specific tissue expression of CHS isoforms occurred. These observations strongly support the idea of CHS functional diversification with shell biomineralization being one of several important functions. Analysis of transcriptome data uncovered the species-specific potential of CHS isoforms in shell formation and a species-specific response to ocean acidification (OA). The impact of OA was not CHS isoform-dependent although in Mytilus, Type I-B and Type II-D gene expression was down-regulated in both M. galloprovincialis and M. coruscus. In summary, during CHS evolution the gene family expanded in bivalves generating a large diversity of isoforms with different structures and with a ubiquitous tissue distribution suggesting that chitin is involved in many biological functions. These findings provide insight into CHS evolution in molluscs and lay the foundation for research into their function and response to environmental changes.

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来源期刊
Molecular Phylogenetics and Evolution
Molecular Phylogenetics and Evolution 生物-进化生物学
CiteScore
7.50
自引率
7.30%
发文量
249
审稿时长
7.5 months
期刊介绍: Molecular Phylogenetics and Evolution is dedicated to bringing Darwin''s dream within grasp - to "have fairly true genealogical trees of each great kingdom of Nature." The journal provides a forum for molecular studies that advance our understanding of phylogeny and evolution, further the development of phylogenetically more accurate taxonomic classifications, and ultimately bring a unified classification for all the ramifying lines of life. Phylogeographic studies will be considered for publication if they offer EXCEPTIONAL theoretical or empirical advances.
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