所见即所得?-- 根据测试强度校正报告的发病率数据

Rasmus Kristoffer Pedersen, Christian Berrig, Tamás Tekeli, Gergely Röst, Viggo Andreasen
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摘要

在 COVID-19 大流行期间,不同类型的非药物干预措施在控制疫情和限制 SARS-CoV-2 病毒传播方面发挥了重要作用。在某些国家,对无症状者进行了大规模的自愿检测,目的是确定无症状和症状前感染者,以及衡量一般人群中的流行率。在这项工作中,我们提出了一个数学模型,用于研究观察到的感染和未观察到的感染与自愿检测率的函数关系。该模型表明,尽管真实感染率有所下降,但检测率的增加会导致观察到的感染率上升。检测率越高,观察到的感染率也越低。观察到的流行率的非单调性解释了在比较各国未经校正的病例数时出现的一些差异。2020/2021 年冬季在丹麦和匈牙利观察到的 COVID-19 流行病就是这种差异的一个例子。该模型为观察到的发病率和真实发病率之间的确定率提供了一个量化指标,从而可以对发病率数据进行检测强度校正。通过将该模型与 2021/2022 年冬季丹麦全国范围内奥米克隆变异体(BA.1 和 BA.2)的流行情况进行比较,我们发现模型估计的累积发病率与血清学研究显示的发病率非常一致。虽然该模型并不能完全反映流行病爆发的复杂性和不同干预措施的效果,但它提供了一种简单的方法,可以根据自愿检测的差异对原始病例数进行校正,从而可以对国际边界和检测行为进行比较。
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What you saw is what you got? -- Correcting reported incidence data for testing intensity
During the COVID-19 pandemic, different types of non-pharmaceutical interventions played an important role in the efforts to control outbreaks and to limit the spread of the SARS-CoV-2 virus. In certain countries, large-scale voluntary testing of non-symptomatic individuals was done, with the aim of identifying asymptomatic and pre-symptomatic infections as well as gauging the prevalence in the general population. In this work, we present a mathematical model, used to investigate the dynamics of both observed and unobserved infections as a function of the rate of voluntary testing. The model indicate that increasing the rate of testing causes the observed prevalence to increase, despite a decrease in the true prevalence. For large testing rates, the observed prevalence also decrease. The non-monotonicity of observed prevalence explains some of the discrepancies seen when comparing uncorrected case-counts between countries. An example of such discrepancy is the COVID-19 epidemics observed in Denmark and Hungary during winter 2020/2021, for which the reported case-counts were comparable but the true prevalence were very different. The model provides a quantitative measure for the ascertainment rate between observed and true incidence, allowing for test-intensity correction of incidence data. By comparing the model to the country-wide epidemic of the Omicron variant (BA.1 and BA.2) in Denmark during the winter 2021/2022, we find a good agreement between the cumulative incidence as estimated by the model and as suggested by serology-studies. While the model does not capture the full complexity of epidemic outbreaks and the effect of different interventions, it provides a simple way to correct raw case-counts for differences in voluntary testing, making comparison across international borders and testing behaviour possible.
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