{"title":"改造大肠杆菌以利用 PET 降解乙二醇作为唯一原料","authors":"Junxi Chi, Pengju Wang, Yidan Ma, Xingmiao Zhu, Leilei Zhu, Ming Chen, Changhao Bi, Xueli Zhang","doi":"10.1186/s13068-024-02568-4","DOIUrl":null,"url":null,"abstract":"<div><p>From both economic and environmental perspectives, ethylene glycol, the principal constituent in the degradation of PET, emerges as an optimal feedstock for microbial cell factories. Traditional methods for constructing <i>Escherichia coli</i> chassis cells capable of utilizing ethylene glycol as a non-sugar feedstock typically involve overexpressing the genes <i>fucO</i> and <i>aldA</i>. However, these approaches have not succeeded in enabling the exclusive use of ethylene glycol as the sole source of carbon and energy for growth. Through ultraviolet radiation-induced mutagenesis and subsequent laboratory adaptive evolution, an EG02 strain emerged from <i>E. coli</i> MG1655 capable of utilizing ethylene glycol as its sole carbon and energy source, demonstrating an uptake rate of 8.1 ± 1.3 mmol/gDW h. Comparative transcriptome analysis guided reverse metabolic engineering, successfully enabling four wild-type <i>E. coli</i> strains to metabolize ethylene glycol exclusively. This was achieved through overexpression of the <i>gcl</i>, <i>hyi</i>, <i>glxR</i>, and <i>glxK</i> genes. Notably, the engineered <i>E. coli</i> chassis cells efficiently metabolized the 87 mM ethylene glycol found in PET enzymatic degradation products following 72 h of fermentation. This work presents a practical solution for recycling ethylene glycol from PET waste degradation products, demonstrating that simply adding M9 salts can effectively convert them into viable raw materials for <i>E. coli</i> cell factories. Our findings also emphasize the significant roles of genes associated with the glycolate and glyoxylate degradation I pathway in the metabolic utilization of ethylene glycol, an aspect frequently overlooked in previous research.</p></div>","PeriodicalId":494,"journal":{"name":"Biotechnology for Biofuels","volume":"17 1","pages":""},"PeriodicalIF":6.1000,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://biotechnologyforbiofuels.biomedcentral.com/counter/pdf/10.1186/s13068-024-02568-4","citationCount":"0","resultStr":"{\"title\":\"Engineering Escherichia coli for utilization of PET degraded ethylene glycol as sole feedstock\",\"authors\":\"Junxi Chi, Pengju Wang, Yidan Ma, Xingmiao Zhu, Leilei Zhu, Ming Chen, Changhao Bi, Xueli Zhang\",\"doi\":\"10.1186/s13068-024-02568-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>From both economic and environmental perspectives, ethylene glycol, the principal constituent in the degradation of PET, emerges as an optimal feedstock for microbial cell factories. Traditional methods for constructing <i>Escherichia coli</i> chassis cells capable of utilizing ethylene glycol as a non-sugar feedstock typically involve overexpressing the genes <i>fucO</i> and <i>aldA</i>. However, these approaches have not succeeded in enabling the exclusive use of ethylene glycol as the sole source of carbon and energy for growth. Through ultraviolet radiation-induced mutagenesis and subsequent laboratory adaptive evolution, an EG02 strain emerged from <i>E. coli</i> MG1655 capable of utilizing ethylene glycol as its sole carbon and energy source, demonstrating an uptake rate of 8.1 ± 1.3 mmol/gDW h. Comparative transcriptome analysis guided reverse metabolic engineering, successfully enabling four wild-type <i>E. coli</i> strains to metabolize ethylene glycol exclusively. This was achieved through overexpression of the <i>gcl</i>, <i>hyi</i>, <i>glxR</i>, and <i>glxK</i> genes. Notably, the engineered <i>E. coli</i> chassis cells efficiently metabolized the 87 mM ethylene glycol found in PET enzymatic degradation products following 72 h of fermentation. This work presents a practical solution for recycling ethylene glycol from PET waste degradation products, demonstrating that simply adding M9 salts can effectively convert them into viable raw materials for <i>E. coli</i> cell factories. Our findings also emphasize the significant roles of genes associated with the glycolate and glyoxylate degradation I pathway in the metabolic utilization of ethylene glycol, an aspect frequently overlooked in previous research.</p></div>\",\"PeriodicalId\":494,\"journal\":{\"name\":\"Biotechnology for Biofuels\",\"volume\":\"17 1\",\"pages\":\"\"},\"PeriodicalIF\":6.1000,\"publicationDate\":\"2024-09-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://biotechnologyforbiofuels.biomedcentral.com/counter/pdf/10.1186/s13068-024-02568-4\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biotechnology for Biofuels\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://link.springer.com/article/10.1186/s13068-024-02568-4\",\"RegionNum\":1,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biotechnology for Biofuels","FirstCategoryId":"5","ListUrlMain":"https://link.springer.com/article/10.1186/s13068-024-02568-4","RegionNum":1,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
从经济和环境角度来看,乙二醇作为 PET 降解过程中的主要成分,是微生物细胞工厂的最佳原料。构建能够利用乙二醇作为非糖原料的大肠杆菌底盘细胞的传统方法通常涉及过表达 fucO 和 aldA 基因。然而,这些方法并没有成功地使乙二醇成为生长所需的唯一碳源和能量来源。通过紫外线辐射诱导突变和随后的实验室适应性进化,从大肠杆菌 MG1655 中产生了一株 EG02 菌株,它能够利用乙二醇作为其唯一的碳和能量来源,吸收率为 8.1 ± 1.3 mmol/gDW h。这是通过过表达 gcl、hyi、glxR 和 glxK 基因实现的。值得注意的是,经改造的大肠杆菌底盘细胞在发酵 72 小时后,能有效代谢 PET 酶降解产物中的 87 mM 乙二醇。这项研究提出了从 PET 废弃物降解产物中回收乙二醇的实用解决方案,证明只需添加 M9 盐就能有效地将其转化为大肠杆菌细胞工厂的可行原料。我们的研究结果还强调了与乙醇酸和乙醛酸降解 I 途径相关的基因在乙二醇代谢利用过程中的重要作用,而这是以往研究中经常忽略的一个方面。
Engineering Escherichia coli for utilization of PET degraded ethylene glycol as sole feedstock
From both economic and environmental perspectives, ethylene glycol, the principal constituent in the degradation of PET, emerges as an optimal feedstock for microbial cell factories. Traditional methods for constructing Escherichia coli chassis cells capable of utilizing ethylene glycol as a non-sugar feedstock typically involve overexpressing the genes fucO and aldA. However, these approaches have not succeeded in enabling the exclusive use of ethylene glycol as the sole source of carbon and energy for growth. Through ultraviolet radiation-induced mutagenesis and subsequent laboratory adaptive evolution, an EG02 strain emerged from E. coli MG1655 capable of utilizing ethylene glycol as its sole carbon and energy source, demonstrating an uptake rate of 8.1 ± 1.3 mmol/gDW h. Comparative transcriptome analysis guided reverse metabolic engineering, successfully enabling four wild-type E. coli strains to metabolize ethylene glycol exclusively. This was achieved through overexpression of the gcl, hyi, glxR, and glxK genes. Notably, the engineered E. coli chassis cells efficiently metabolized the 87 mM ethylene glycol found in PET enzymatic degradation products following 72 h of fermentation. This work presents a practical solution for recycling ethylene glycol from PET waste degradation products, demonstrating that simply adding M9 salts can effectively convert them into viable raw materials for E. coli cell factories. Our findings also emphasize the significant roles of genes associated with the glycolate and glyoxylate degradation I pathway in the metabolic utilization of ethylene glycol, an aspect frequently overlooked in previous research.
期刊介绍:
Biotechnology for Biofuels is an open access peer-reviewed journal featuring high-quality studies describing technological and operational advances in the production of biofuels, chemicals and other bioproducts. The journal emphasizes understanding and advancing the application of biotechnology and synergistic operations to improve plants and biological conversion systems for the biological production of these products from biomass, intermediates derived from biomass, or CO2, as well as upstream or downstream operations that are integral to biological conversion of biomass.
Biotechnology for Biofuels focuses on the following areas:
• Development of terrestrial plant feedstocks
• Development of algal feedstocks
• Biomass pretreatment, fractionation and extraction for biological conversion
• Enzyme engineering, production and analysis
• Bacterial genetics, physiology and metabolic engineering
• Fungal/yeast genetics, physiology and metabolic engineering
• Fermentation, biocatalytic conversion and reaction dynamics
• Biological production of chemicals and bioproducts from biomass
• Anaerobic digestion, biohydrogen and bioelectricity
• Bioprocess integration, techno-economic analysis, modelling and policy
• Life cycle assessment and environmental impact analysis