NuRD染色质重塑是修复秀丽隐杆线虫种系中外源性DSB的必要条件

Deepshikha Ananthaswamy, Kelin Funes, Thiago Borges, Scott P. Roques, Nina Fassnacht, Sereen El Jamal, Paula M. Checchi, Teresa W Lee
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摘要

生物依靠 DNA 修复途径的协调网络来保护基因组免受有毒双链断裂(DSB)的伤害,尤其是在生殖细胞中。所有修复机制都必须成功地与当地染色质环境进行协商,才能访问 DNA。例如,核糖体可以通过高度保守的核糖体重塑和去乙酰化酶(NuRD)复合物重新定位。在秀丽隐杆线虫(Caenorhabditis elegans)中,NuRD在生殖系中发挥着修复DSB的功能--NuRD的ATP酶亚基LET-418/CHD4的缺失会阻止DSB的修复,从而降低生育能力。在这项研究中,我们用外源DNA损伤挑战种系,以更好地了解NuRD在修复DSB中的作用。我们发现,let-418突变体对顺铂和羟基脲过敏:暴露于这两种诱变剂都会阻碍DSB修复,产生非整倍体卵母细胞,并严重降低生育能力和胚胎存活率。这些缺陷与范可尼贫血症(FA)DNA 修复途径受损时出现的缺陷相似,而且我们发现 LET-418 的活性与 FA 成分 FCD-2/FANCD2 的活性具有外显性。我们提出了一个模型,在该模型中,NuRD被招募到DNA病变部位,以重塑染色质并允许FA通路元件进入。这些结果共同表明,NuRD参与了内源性DSB和外源性DNA病变的修复,以保持发育中生殖细胞基因组的完整性。
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NuRD chromatin remodeling is required to repair exogenous DSBs in the Caenorhabditis elegans germline
Organisms rely on coordinated networks of DNA repair pathways to protect genomes against toxic double-strand breaks (DSBs), particularly in germ cells. All repair mechanisms must successfully negotiate the local chromatin environment in order to access DNA. For example, nucleosomes can be repositioned by the highly conserved Nucleosome Remodeling and Deacetylase (NuRD) complex. In Caenorhabditis elegans, NuRD functions in the germline to repair DSBs - the loss of NuRD's ATPase subunit, LET-418/CHD4, prevents DSB resolution and therefore reduces fertility. In this study, we challenge germlines with exogenous DNA damage to better understand NuRD's role in repairing DSBs. We find that let-418 mutants are hypersensitive to cisplatin and hydroxyurea: exposure to either mutagen impedes DSB repair, generates aneuploid oocytes, and severely reduces fertility and embryonic survival. These defects resemble those seen when the Fanconi anemia (FA) DNA repair pathway is compromised, and we find that LET-418's activity is epistatic to that of the FA component FCD-2/FANCD2. We propose a model in which NuRD is recruited to the site of DNA lesions to remodel chromatin and allow access for FA pathway components. Together, these results implicate NuRD in the repair of both endogenous DSBs and exogenous DNA lesions to preserve genome integrity in developing germ cells.
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