MADAS:评估材料科学数据相似性的 Python 框架

IF 6.2 Q1 CHEMISTRY, MULTIDISCIPLINARY Digital discovery Pub Date : 2024-09-19 DOI:10.1039/d4dd00258j
Martin Kuban, Santiago Rigamonti, Claudia Draxl
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引用次数: 0

摘要

计算材料科学产生了大量数据,包括高通量计算和单项研究。由于计算方法和近似方法种类繁多,导致大量可用数据的真实性非常高,因此从这一庞大的异构数据池中提取知识具有挑战性。解决这一问题的方法之一是使用相似性度量对数据进行分组,同时了解可能存在的差异。在此,我们介绍 MADAS,一个用于计算材料属性之间相似性关系的 Python 框架。它可用于自动下载各种来源的数据,计算材料之间的描述符和相似性,通过材料属性分析材料之间的关系,并可结合各种现有的机器学习方法。我们将解释软件包的架构,并通过具有代表性的示例展示其强大功能。
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MADAS: A Python framework for assessing similarity in materials-science data
Computational materials science produces large quantities of data, both in terms of high-throughput calculations and individual studies. Extracting knowledge from this large and heterogeneous pool of data is challenging due to the wide variety of computational methods and approximations, resulting in significant veracity in the sheer amount of available data. One way of dealing with the problem is using similarity measures to group data, but also to understand where possible differences may come from. Here, we present MADAS, a Python framework for computing similarity relations between material properties. It can be used to automate the download of data from various sources, compute descriptors and similarities between materials, analyze the relationship between materials through their properties, and can incorporate a variety of existing machine learning methods. We explain the architecture of the package and demonstrate its power with representative examples.
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Back cover ArcaNN: automated enhanced sampling generation of training sets for chemically reactive machine learning interatomic potentials. Sorting polyolefins with near-infrared spectroscopy: identification of optimal data analysis pipelines and machine learning classifiers†‡ High accuracy uncertainty-aware interatomic force modeling with equivariant Bayesian neural networks† Correction: A smile is all you need: predicting limiting activity coefficients from SMILES with natural language processing
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