通过自适应决策树分类器预测 COVID-19 住院人数的局部激增

Rachel E Murray-Watson, Alyssa Bilinski, Reza Yaesoubi
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摘要

在 COVID-19 大流行期间,美国许多社区的住院人数激增,使当地医院的医疗能力不堪重负,并影响了整体医疗质量。即使在有效疫苗上市后,由于免疫力下降、强化免疫接种率低以及 SARS-CoV-2 不断出现新变种,许多社区仍面临 COVID-19 相关住院人数激增的高风险。一些风险度量标准,如疾病预防控制中心的社区水平,是根据常规监测数据来预测 COVID-19 对社区医疗保健系统的影响。但是,这些指标的实用性有限,因为它们没有根据不断积累的数据进行例行更新,也没有与具体结果直接挂钩,例如 COVID-19 住院人数的激增超出了当地的承受能力。回归模型可以解决这些局限性,但它们的可解释性有限,无法传达预测背后的推理。在本文中,我们对 "实时 "开发的决策树分类器进行了评估,以预测 2020 年 7 月至 2022 年 11 月期间 COVID-19 在当地造成的住院人数激增。这些分类器将为当地决策者提供直观、可解释的决策规则,使其能够理解并采取行动,并且通过每周更新,可对疫情变化做出响应。我们的研究表明,这些分类器具有合理的预测能力,接收者工作特征曲线下面积(auROC)为 80%。这些分类器在时间上(即在疫情持续期间)和空间上(即在美国各县)都保持了良好的性能。我们还发现,这些分类器在预测高医院入住率方面的表现优于疾病预防控制中心的社区水平。
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Forecasting local surges in COVID-19 hospitalizations through adaptive decision tree classifiers
During the COVID-19 pandemic, many communities across the US experienced surges in hospitalizations, which strained the local hospital capacity and affected the overall quality of care. Even when effective vaccines became available, many communities remained at high risk of surges in COVID-19-related hospitalizations due to waning immunity, low uptake of booster vaccinations, and the continual emergence of new variations of SARS-CoV-2. Some risk metrics, such as the CDC's Community Levels, were developed to predict the impact of COVID-19 on the community-level healthcare system based on routine surveillance data. However, they had limited utility as they were not routinely updated based on accumulating data and were not directly linked to specific outcomes, such as surges in COVID-19 hospitalizations beyond local capacities. Regression models could resolve these limitations, but they have limited interpretability and do not convey the reasoning behind their predictions. In this paper, we evaluated decision tree classifiers that were developed in "real-time" to predict surges in local hospitalizations due to COVID-19 between July 2020 and November 2022. These classifiers would have provided visually intuitive and interpretable decision rules for local decision-makers to understand and act upon, and by being updated weekly, would have responded to changes in the epidemic. We showed that these classifiers exhibit reasonable predictive ability with the area under the receiver operating characteristic curve (auROC) >80%. These classifiers maintained their performance temporally (i.e, over the duration of the pandemic) and spatially (i.e., across US counties). We also showed that these classifiers outperformed the CDC's Community Levels for predicting high hospital occupancy.
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