I 期联合试验的部分排序贝叶斯逻辑回归模型和计算效率高的操作先验规范方法

Weishi Chen, Pavel Mozgunov
{"title":"I 期联合试验的部分排序贝叶斯逻辑回归模型和计算效率高的操作先验规范方法","authors":"Weishi Chen, Pavel Mozgunov","doi":"arxiv-2409.10352","DOIUrl":null,"url":null,"abstract":"Recent years have seen increased interest in combining drug agents and/or\nschedules. Several methods for Phase I combination-escalation trials are\nproposed, among which, the partial ordering continual reassessment method\n(POCRM) gained great attention for its simplicity and good operational\ncharacteristics. However, the one-parameter nature of the POCRM makes it\nrestrictive in more complicated settings such as the inclusion of a control\ngroup. This paper proposes a Bayesian partial ordering logistic model (POBLRM),\nwhich combines partial ordering and the more flexible (than CRM) two-parameter\nlogistic model. Simulation studies show that the POBLRM performs similarly as\nthe POCRM in non-randomised settings. When patients are randomised between the\nexperimental dose-combinations and a control, performance is drastically\nimproved. Most designs require specifying hyper-parameters, often chosen from\nstatistical considerations (operational prior). The conventional \"grid search''\ncalibration approach requires large simulations, which are computationally\ncostly. A novel \"cyclic calibration\" has been proposed to reduce the\ncomputation from multiplicative to additive. Furthermore, calibration processes\nshould consider wide ranges of scenarios of true toxicity probabilities to\navoid bias. A method to reduce scenarios based on scenario-complexities is\nsuggested. This can reduce the computation by more than 500 folds while\nremaining operational characteristics similar to the grid search.","PeriodicalId":501425,"journal":{"name":"arXiv - STAT - Methodology","volume":"28 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Partial Ordering Bayesian Logistic Regression Model for Phase I Combination Trials and Computationally Efficient Approach to Operational Prior Specification\",\"authors\":\"Weishi Chen, Pavel Mozgunov\",\"doi\":\"arxiv-2409.10352\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Recent years have seen increased interest in combining drug agents and/or\\nschedules. Several methods for Phase I combination-escalation trials are\\nproposed, among which, the partial ordering continual reassessment method\\n(POCRM) gained great attention for its simplicity and good operational\\ncharacteristics. However, the one-parameter nature of the POCRM makes it\\nrestrictive in more complicated settings such as the inclusion of a control\\ngroup. This paper proposes a Bayesian partial ordering logistic model (POBLRM),\\nwhich combines partial ordering and the more flexible (than CRM) two-parameter\\nlogistic model. Simulation studies show that the POBLRM performs similarly as\\nthe POCRM in non-randomised settings. When patients are randomised between the\\nexperimental dose-combinations and a control, performance is drastically\\nimproved. Most designs require specifying hyper-parameters, often chosen from\\nstatistical considerations (operational prior). The conventional \\\"grid search''\\ncalibration approach requires large simulations, which are computationally\\ncostly. A novel \\\"cyclic calibration\\\" has been proposed to reduce the\\ncomputation from multiplicative to additive. Furthermore, calibration processes\\nshould consider wide ranges of scenarios of true toxicity probabilities to\\navoid bias. A method to reduce scenarios based on scenario-complexities is\\nsuggested. This can reduce the computation by more than 500 folds while\\nremaining operational characteristics similar to the grid search.\",\"PeriodicalId\":501425,\"journal\":{\"name\":\"arXiv - STAT - Methodology\",\"volume\":\"28 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-09-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - STAT - Methodology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2409.10352\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - STAT - Methodology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2409.10352","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

近年来,人们对药物制剂和/或时间表的组合越来越感兴趣。人们提出了几种用于 I 期联合用药升级试验的方法,其中部分排序连续再评估法(POCRM)因其简便性和良好的操作特性而备受关注。然而,POCRM 的单参数特性使其在纳入对照组等更复杂的情况下受到限制。本文提出了贝叶斯部分排序逻辑模型(POBLRM),它结合了部分排序和更灵活(比 CRM 更灵活)的双参数逻辑模型。模拟研究表明,POBLRM 在非随机环境下的表现与 POCRM 相似。当病人在实验剂量组合和对照组之间进行随机分配时,性能会大幅提高。大多数设计都需要指定超参数,这些参数通常是从统计考虑因素(操作先验)中选择的。传统的 "网格搜索 "校准方法需要进行大量模拟,计算成本很高。有人提出了一种新颖的 "循环校准 "方法,将计算量从乘法减少到加法。此外,校准过程应考虑广泛的真实毒性概率情景,以避免偏差。建议采用一种基于情景复杂度的方法来减少情景。这可以将计算量减少 500 倍以上,同时保持与网格搜索类似的运行特性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Partial Ordering Bayesian Logistic Regression Model for Phase I Combination Trials and Computationally Efficient Approach to Operational Prior Specification
Recent years have seen increased interest in combining drug agents and/or schedules. Several methods for Phase I combination-escalation trials are proposed, among which, the partial ordering continual reassessment method (POCRM) gained great attention for its simplicity and good operational characteristics. However, the one-parameter nature of the POCRM makes it restrictive in more complicated settings such as the inclusion of a control group. This paper proposes a Bayesian partial ordering logistic model (POBLRM), which combines partial ordering and the more flexible (than CRM) two-parameter logistic model. Simulation studies show that the POBLRM performs similarly as the POCRM in non-randomised settings. When patients are randomised between the experimental dose-combinations and a control, performance is drastically improved. Most designs require specifying hyper-parameters, often chosen from statistical considerations (operational prior). The conventional "grid search'' calibration approach requires large simulations, which are computationally costly. A novel "cyclic calibration" has been proposed to reduce the computation from multiplicative to additive. Furthermore, calibration processes should consider wide ranges of scenarios of true toxicity probabilities to avoid bias. A method to reduce scenarios based on scenario-complexities is suggested. This can reduce the computation by more than 500 folds while remaining operational characteristics similar to the grid search.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Poisson approximate likelihood compared to the particle filter Optimising the Trade-Off Between Type I and Type II Errors: A Review and Extensions Bias Reduction in Matched Observational Studies with Continuous Treatments: Calipered Non-Bipartite Matching and Bias-Corrected Estimation and Inference Forecasting age distribution of life-table death counts via α-transformation Probability-scale residuals for event-time data
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1