用于评估鸟网识别准确性和群落构成的后处理框架

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-09-13 DOI:10.1111/ibi.13357
Michael C. Thompson, Mark J. Ducey, John S. Gunn, Rebecca J. Rowe
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引用次数: 0

摘要

被动采集的声学数据在野生动物研究中越来越常见,这也促使人们开发机器学习方法来提取大量音频文件并对其进行分类。BirdNET 是一个开源的自动预测模型,因其对终端用户没有培训要求而广受欢迎。有几项研究试图测试 BirdNET 的准确性,并说明其在单个或多个物种占位建模方面的潜力。然而,这些技术要么需要丰富的统计知识,要么需要强大的计算能力才能应用于大型数据集。此外,使用 BirdNET 和典型野外方法计算的鸟类栖息地和群落组成也缺乏比较。在此,我们建立了一个评估 BirdNET 准确性的框架,使用广义线性混合模型来确定特定物种的置信分阈值。然后,我们将我们的模型和另一种后处理方法下的群落组成与佛蒙特州东北部同地点点计数调查收集的实地数据进行比较。我们的框架优于另一种后处理方法,得出的物种组成与点计数调查相似。我们的工作凸显了准确度和置信度之间潜在的不匹配,以及制定特定物种阈值的重要性。该框架可促进对大型声学数据集的研究,并可应用于 BirdNET 或其他自动预测模型的输出。
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A post‐processing framework for assessing BirdNET identification accuracy and community composition
Passively collected acoustic data have become increasingly common in wildlife research and have prompted the development of machine‐learning approaches to extract and classify large sets of audio files. BirdNET is an open‐source automatic prediction model that is popular because of its lack of training requirements for end users. Several studies have sought to test the accuracy of BirdNET and illustrate its potential in occupancy modelling of single or multiple species. However, these techniques either require extensive statistical knowledge or computational power to be applied to large datasets. In addition, there is a lack of comparisons of occupancy and community composition calculated using BirdNET and typical field methods. Here we develop a framework for assessing the accuracy of BirdNET using generalized linear mixed models to determine species‐specific confidence score thresholds. We then compare community composition under our model and another post‐processing approach to field data collected from co‐located point count surveys in northeastern Vermont. Our framework outperformed the other post‐processing method and resulted in species composition similar to that of point count surveys. Our work highlights the potential mismatch between accuracy and confidence score and the importance of developing species‐specific thresholds. The framework can facilitate research on large acoustic datasets and can be applied to output from BirdNET or other automatic prediction models.
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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