FN1是一种可靠的甲状腺癌预后生物标志物,与肿瘤免疫和不良预后有关。

IF 2.5 4区 医学 Q3 ONCOLOGY Oncology Letters Pub Date : 2024-08-26 DOI:10.3892/ol.2024.14643
Huili Pan,Zhiyan Luo,Feng Lin,Jing Zhang,Ting Xiong,Yurong Hong,Bohao Sun,Yan Yang
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引用次数: 0

摘要

甲状腺癌(THCA)是一种影响内分泌系统的恶性肿瘤。目前,由于缺乏合适的药物和预后标志物,有效治疗甲状腺癌的方法仍然难以找到,尤其是髓样癌和未分化癌。患者的 RNA 序列和临床数据来自癌症基因组图谱和基因型-组织表达数据库。对与THCA相关的差异表达基因进行了蛋白-蛋白相互作用分析。此外,还评估了纤连蛋白1(FN1)、临床数据、免疫检查点基因和免疫细胞浸润之间的关联。通过基因组富集分析评估了 FN1 基因的潜在功能作用。免疫组化法评估了 103 例 THCA 中 FN1 的表达情况,其中包括 32 例乳头状癌、30 例滤泡状癌、35 例髓质癌和 6 例未分化癌。最后,构建了 11 个共表达模块,并评估了 5 个已确定的中心基因(FN1、粘蛋白-1、角蛋白 19、细胞内粘附分子 1 和神经细胞粘附分子)的表达情况。结果表明,较高的 FN1 基因表达水平与较高的病理分期和肿瘤分期密切相关,并与 THCA 的免疫细胞浸润显著相关。在确诊为乳头状癌、滤泡状癌、髓样癌和未分化癌等四种类型的 THCA 患者中,FN1 蛋白表达水平明显升高。与 FN1 表达水平较高的患者相比,被诊断为髓样癌和未分化癌且 FN1 表达水平较低的患者具有明显的生存优势。总之,本研究发现了五个参与 THCA 发病和进展的枢纽基因。此外,FN1可作为THCA的候选生物标志物和治疗靶点,并可能是介导THCA免疫浸润的关键基因。
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FN1, a reliable prognostic biomarker for thyroid cancer, is associated with tumor immunity and an unfavorable prognosis.
Thyroid cancer (THCA) is a malignant tumor that affects the endocrine system. At present, an effective treatment for THCA remains elusive, particularly for medullary carcinoma and undifferentiated carcinoma, due to the lack of suitable medications and prognostic markers. Patient RNA-sequencing and clinical data were obtained from The Cancer Genome Atlas and Genotype-Tissue Expression databases. Protein-protein interaction analyses were performed for differentially expressed genes related to THCA. Moreover, the associations between fibronectin 1 (FN1), clinical data, immune checkpoint genes and immune cell infiltration was assessed. The potential functional role of the FN1 gene was evaluated through gene set enrichment analysis. Immunohistochemistry was used to assess FN1 expression in 103 cases of THCA, comprising 32 with papillary carcinoma, 30 with follicular carcinoma, 35 with medullary carcinoma and 6 with undifferentiated carcinoma. Finally, 11 co-expression modules were constructed and the expression of five identified hub genes (FN1, mucin-1, keratin 19, intracellular adhesion molecule 1 and neural cell adhesion molecule) were evaluated. The results demonstrated that higher FN1 gene expression levels were strongly associated with a higher pathologic stage and tumor stage, and were significantly associated with immune cell infiltration in THCA. Significant increases in FN1 protein expression levels were noted among patients diagnosed with four types of THCA, comprising papillary carcinoma, follicular carcinoma, medullary carcinoma and undifferentiated carcinoma. Patients diagnosed with medullary carcinoma and undifferentiated carcinoma, and with low FN1 expression levels, exhibited a significant survival advantage compared with those with high FN1 expression levels. In conclusion, the present study identified five hub genes involved in the onset and progression of THCA. Furthermore, FN1 could serve as a candidate biomarker and a therapeutic target for THCA and may be a key gene mediating THCA immune infiltration.
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来源期刊
Oncology Letters
Oncology Letters ONCOLOGY-
CiteScore
5.70
自引率
0.00%
发文量
412
审稿时长
2.0 months
期刊介绍: Oncology Letters is a monthly, peer-reviewed journal, available in print and online, that focuses on all aspects of clinical oncology, as well as in vitro and in vivo experimental model systems relevant to the mechanisms of disease. The principal aim of Oncology Letters is to provide the prompt publication of original studies of high quality that pertain to clinical oncology, chemotherapy, oncogenes, carcinogenesis, metastasis, epidemiology and viral oncology in the form of original research, reviews and case reports.
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