预测放疗会诊后 30 天内癌症患者的死亡率,为姑息放疗分型决策提供依据

Kendall Kiser, Ashish Vaidyanathan, Matthew Schuelke, Joshua Denzer, Trudy Landreth, Christopher Abraham, Adam Wilcox
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摘要

背景肿瘤放疗医生和内科医生通过卡诺夫斯基表现状态(KPS)等量表评估患者即将死亡的风险,并根据这些评估结果做出治疗决定。然而,我们假设,与仅根据患者年龄和医生报告的 KPS 建立的模型相比,根据结构化电子健康记录 (EHR) 数据建立的统计模型能更好地预测放疗会诊后 30 天内患者的死亡情况。方法从电子病历数据库中抽取了2018年6月至2024年2月期间在放疗科就诊的患者的临床数据,包括患者人口统计学、实验室结果、药物、合并症、KPS、癌症分期、肿瘤治疗史、肿瘤学家笔记、放射科医生报告和病理学家叙述。结果 在 38,262 名患者中,951 人(2.5%)在接受放射治疗后 30 天内死亡。放射肿瘤学家从 34.5 千兆字节的表格数据中选择或推导出 2,977 个临床特征,然后使用方差分析 F 值将其减少到 1,000 个特征。使用 0.2 的事件概率分类阈值,优化的逻辑回归、随机森林和梯度提升决策分类器的测试准确率(分别为 0.97、0.98 和 0.98)和 F1 分数(分别为 0.50、0.54 和 0.52)都很高。随机森林模型的接收者操作曲线下面积和精确度-召回曲线下面积分别为 0.94 和 0.55,优于仅用患者年龄和 KPS 训练的模型(0.61 和 0.06)。结论根据医生对结构化电子病历数据的特征空间进行编辑而建立的统计模型,比仅根据患者年龄和医生评估的 KPS 建立的模型更能预测放疗会诊后 30 天内患者的死亡情况。通过临床可解释的特征权重,这些模型可以影响治疗决策,如姑息放疗疗程的长短。
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Predicting cancer patient mortality within 30 days of radiotherapy consultation to inform palliative radiotherapy fractionation decisions
Background Radiation and medical oncologists evaluate patients' risk of imminent mortality with scales like Karnofsky Performance Status (KPS) and predicate treatment decisions on these evaluations. However, we hypothesized that statistical models derived from structured electronic health record (EHR) data could predict patient deaths within 30 days of radiotherapy consultation better than models developed only with patient age and physician-reported KPS. Methods Clinical data from patients who consulted in a radiotherapy department from June 2018 - February 2024 were abstracted from EHR databases, including patient demographics, laboratory results, medications, comorbidities, KPS, cancer stages, oncologic treatment histories, oncologist notes, radiologist reports, and pathologist narratives. A subset of structured features known or believed to be associated with mortality were curated and used to train and test logistic regression, random forest, and gradient-boosted decision classifiers. Results Of 38,262 patients, 951 (2.5%) died within 30 days of radiotherapy consultation. From 34.5 gigabytes of tabular data, 2,977 clinical features were chosen or derived by a radiation oncologist, then reduced to 1,000 features using ANOVA F values. Using an event probability classification threshold of 0.2, optimized logistic regression, random forest, and gradient-boosted decision classifiers tested with high accuracy (0.97, 0.98, and 0.98, respectively) and F1 scores (0.50, 0.54, and 0.52). The areas under receiver operating and precision-recall curves for the random forest model were respectively 0.94 and 0.55, which outperformed a model trained only with patient age and KPS (0.61 and 0.06). Models prominently weighed features that were rationally associated with mortality. Conclusion Statistical models developed from a physician-curated feature space of structured EHR data predicted patient deaths within 30 days of radiotherapy consultation better than a model developed only with a patient's age and physician-assessed KPS. With clinically explicable feature weights, these models could influence treatment decisions such as the length of palliative radiotherapy courses.
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